RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 C4BP0C0L5 1744 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 FAM208AQ9UK61 1670 aaKnown RBP4.04□□□□□ -1.76
HERC1-215ENST00000561436 TISP43B9A030 160 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 PRYO14603 147 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 TULP3O75386 442 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 CNTN5O94779 1100 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 SGPL1O95470 568 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 CYP21A2P08686 494 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 PEPDP12955 493 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 ACP5P13686 325 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 HOXB9P17482 250 aaPredicted RBP4.04□□□□□ -1.76
HERC1-215ENST00000561436 RPP30P78346 268 aaKnown RBP4.04□□□□□ -1.76
HERC1-215ENST00000561436 NHLH1Q02575 133 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 DMWDQ09019 674 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 FOXF2Q12947 444 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 PKN2Q16513 984 aaKnown RBP4.04□□□□□ -1.76
HERC1-215ENST00000561436 NFIL3Q16649 462 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 AWAT1Q58HT5 328 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 PRR5LQ6MZQ0 368 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 DHRS13Q6UX07 377 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 DSTYKQ6XUX3 929 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 GALNT7Q86SF2 657 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 ST8SIA4Q92187 359 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 CELF1Q92879 486 aaKnown RBP4.04□□□□□ -1.76
HERC1-215ENST00000561436 KAZALD1Q96I82 304 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 ASB2Q96Q27 587 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 NPLQ9BXD5 320 aaPredicted RBP4.04□□□□□ -1.76
HERC1-215ENST00000561436 TMX4Q9H1E5 349 aaPredicted RBP4.04□□□□□ -1.76
HERC1-215ENST00000561436 PDCL3Q9H2J4 239 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 STN1Q9H668 368 aaKnown RBP4.04□□□□□ -1.76
HERC1-215ENST00000561436 SMC4Q9NTJ3 1288 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 MTMR4Q9NYA4 1195 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 SEMA5BQ9P283 1151 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 KLQ9UEF7 1012 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 TNFSF13BQ9Y275 285 aa4.04□□□□□ -1.76
HERC1-215ENST00000561436 KIF7Q2M1P5 1343 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 ITIH6Q6UXX5 1313 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 BTAF1O14981 1849 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 SBF2Q86WG5 1849 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 ERVV-1B6SEH8 477 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 MCIDASD6RGH6 385 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 INPPL1O15357 1258 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 HTATSF1O43719 755 aaKnown RBP4.03□□□□□ -1.76
HERC1-215ENST00000561436 STRNO43815 780 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 PROP1O75360 226 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 HLA-DQA2P01906 255 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 CD63P08962 238 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 PKMP14618 531 aaKnown RBP4.03□□□□□ -1.76
HERC1-215ENST00000561436 TNFAIP3P21580 790 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 SFPQP23246 707 aaKnown RBP eCLIP4.03□□□□□ -1.76
HERC1-215ENST00000561436 SHC2P98077 582 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 MPP1Q00013 466 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 B4GALNT1Q00973 533 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 SLC14A1Q13336 389 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 GAB1Q13480 694 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 CAMK1Q14012 370 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 BAK1Q16611 211 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 PROSER3Q2NL68 480 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 CRY2Q49AN0 593 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 C10orf76Q5T2E6 689 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 PRAMEF17Q5VTA0 474 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 TBC1D9BQ66K14 1250 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 ZNF790Q6PG37 636 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 ADGRG6Q86SQ4 1221 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 ARMC8Q8IUR7 673 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 SCN4BQ8IWT1 228 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 ADGRF3Q8IZF5 1079 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 VPS52Q8N1B4 723 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 ZNF366Q8N895 744 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 TNIP2Q8NFZ5 429 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 RFWD2Q8NHY2 731 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 ZCCHC10Q8TBK6 192 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 HASPINQ8TF76 798 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 PIGKQ92643 395 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 CAPNS2Q96L46 248 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 NYXQ9GZU5 481 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 PAIP1Q9H074 479 aaKnown RBP4.03□□□□□ -1.76
HERC1-215ENST00000561436 OSBPL5Q9H0X9 879 aaPredicted RBP4.03□□□□□ -1.76
HERC1-215ENST00000561436 ACAD9Q9H845 621 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 VEZTQ9HBM0 779 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 PREBQ9HCU5 417 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 PPP1R14DQ9NXH3 145 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 HSF4Q9ULV5 492 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 ABT1Q9ULW3 272 aaKnown RBP4.03□□□□□ -1.76
HERC1-215ENST00000561436 OSGIN2Q9Y236 505 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 RCE1Q9Y256 329 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 KNSTRNQ9Y448 316 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 LY75O60449 1722 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 C5P01031 1676 aa4.03□□□□□ -1.76
HERC1-215ENST00000561436 TCRBV5S1A1TA0A578 114 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 WDR91A4D1P6 747 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 DNAJC9-AS1A6NH13 148 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 NPIPB13A6NJU9 1138 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 SH2D7A6NKC9 451 aaPredicted RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 LINC01548A6NM66 108 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 NPIPB5A8MRT5 1133 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 NPIPB4C9JG80 1138 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 DSCR3O14972 297 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 CAMTA2O94983 1202 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms