RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	RXFP2	Q8WXD0	754 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	BAP1	Q92560	729 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	ARHGEF2	Q92974	986 aa	Known RBP	13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	UBL7	Q96S82	380 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	DUSP23	Q9BVJ7	150 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	MAGEH1	Q9H213	219 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	TMEM248	Q9NWD8	314 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	DACH1	Q9UI36	760 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	KLF15	Q9UIH9	416 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	FCF1	Q9Y324	198 aa	Known RBP	13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	ACTL7A	Q9Y615	435 aa		13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF31-223	ENST00000560754	C2CD4B	A6NLJ0	364 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	C16orf96	A6NNT2	1141 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	FAM72C	H0Y354	149 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754		K7ESM1	405 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	RIOK3	O14730	519 aa	Known RBP	13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	LZTS3	O60299	673 aa	Predicted RBP	13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	POP4	O95707	220 aa	Known RBP	13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	ALPPL2	P10696	532 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	NME1	P15531	152 aa	Known RBP	13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	PTPN9	P43378	593 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	MAPKAPK2	P49137	400 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	DUSP3	P51452	185 aa	Predicted RBP	13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	DNA2	P51530	1060 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	SGCG	Q13326	291 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	MYLK3	Q32MK0	819 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	TBC1D25	Q3MII6	688 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	ARL13B	Q3SXY8	428 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	ZNF805	Q5CZA5	627 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	ZNF542P	Q5EBM4	170 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	FAM72A	Q5TYM5	149 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	FAM72D	Q6L9T8	149 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	PARS2	Q7L3T8	475 aa	Known RBP	13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	STRADA	Q7RTN6	431 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	TMC6	Q7Z403	805 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	FAM72B	Q86X60	149 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	DRC7	Q8IY82	874 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	CENPT	Q96BT3	561 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	GAN	Q9H2C0	597 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	DNAJC28	Q9NX36	388 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	NEU3	Q9UQ49	428 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	LRRK1	Q38SD2	2015 aa		13.88	□□□□□ -0.19
RNF31-223	ENST00000560754	KIF26B	Q2KJY2	2108 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	FAM170A	A1A519	330 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	IGLON5	A6NGN9	336 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	TPP1	O14773	563 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	AREL1	O15033	823 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	FFAR2	O15552	330 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	SPINT1	O43278	529 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	KDELR3	O43731	214 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	DXO	O77932	396 aa	Known RBP	13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	GSR	P00390	522 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	PLEK	P08567	350 aa	Predicted RBP	13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	UNG	P13051	313 aa	Predicted RBP	13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	RABIF	P47224	123 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	LSS	P48449	732 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	JAM2	P57087	298 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	GEMIN4	P57678	1058 aa	Known RBP	13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	PFN3	P60673	137 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	FMO1	Q01740	532 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	PTP4A2	Q12974	167 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	KDM7A	Q6ZMT4	941 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	LSMEM2	Q8N112	164 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	OR2AP1	Q8NGE2	309 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	ENOX1	Q8TC92	643 aa	Known RBP	13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	GPT2	Q8TD30	523 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	SLC20A1	Q8WUM9	679 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	HIC2	Q96JB3	615 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	METTL5	Q9NRN9	209 aa	Known RBP	13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	CHMP5	Q9NZZ3	219 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	DNAI1	Q9UI46	699 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	SALL4	Q9UJQ4	1053 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	HPCAL4	Q9UM19	191 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	TENM4	Q6N022	2769 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	PIEZO2	Q9H5I5	2752 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	ZNF462	Q96JM2	2506 aa		13.87	□□□□□ -0.19
RNF31-223	ENST00000560754	PES1	O00541	588 aa	Known RBP	13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	FPGT	O14772	594 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	ATXN7	O15265	892 aa	Predicted RBP	13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	NEBL	O76041	1014 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	GFPT2	O94808	682 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	LRIG2	O94898	1065 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	MYF5	P13349	255 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	SDC4	P31431	198 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	GK	P32189	559 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	RFC1	P35251	1148 aa	Predicted RBP	13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	SOX5	P35711	763 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	ABL2	P42684	1182 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	HDAC4	P56524	1084 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	GSC	P56915	257 aa	Predicted RBP	13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	SNRPD1	P62314	119 aa	Known RBP	13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	TLE3	Q04726	772 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	EIF2B5	Q13144	721 aa	Known RBP	13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	POLD3	Q15054	466 aa	Predicted RBP	13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	TPRG1L	Q5T0D9	272 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	CDKAL1	Q5VV42	579 aa		13.86	□□□□□ -0.19
RNF31-223	ENST00000560754	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms