RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 PDCD7Q8N8D1 485 aaKnown RBP14.32□□□□□ -0.12
TPM1-223ENST00000560445 ASB12Q8WXK4 309 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 ARRDC3Q96B67 414 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 TM6SF2Q9BZW4 377 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 USP29Q9HBJ7 922 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 MRPL47Q9HD33 250 aaKnown RBP14.32□□□□□ -0.12
TPM1-223ENST00000560445 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
TPM1-223ENST00000560445 TMEM63CQ9P1W3 806 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 DKK4Q9UBT3 224 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 FCF1Q9Y324 198 aaKnown RBP14.32□□□□□ -0.12
TPM1-223ENST00000560445 HS3ST3A1Q9Y663 406 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 CHD5Q8TDI0 1954 aa14.32□□□□□ -0.12
TPM1-223ENST00000560445 FAM170AA1A519 330 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 WASH4PA8MWX3 477 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 FPGTO14772 594 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 CREB3O43889 395 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 SERPINC1P01008 464 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 GZMAP12544 262 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 ATP1A3P13637 1013 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 CKMT2P17540 419 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 XPAP23025 273 aaPredicted RBP14.31□□□□□ -0.12
TPM1-223ENST00000560445 PSMA2P25787 234 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 RABIFP47224 123 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 RHOAP61586 193 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 HNRNPKP61978 463 aaKnown RBP eCLIP14.31□□□□□ -0.12
TPM1-223ENST00000560445 E2F1Q01094 437 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 TMEM259Q4ZIN3 620 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 CCDC157Q569K6 752 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 CFAP58Q5T655 872 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 APTXQ7Z2E3 356 aaKnown RBP14.31□□□□□ -0.12
TPM1-223ENST00000560445 ABI3BPQ7Z7G0 1075 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 PROSER1Q86XN7 944 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 UMODL1-AS1Q8N2C9 162 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 HCAR2Q8TDS4 363 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 FNIP1Q8TF40 1166 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 NXPE2Q96DL1 559 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 DUSP23Q9BVJ7 150 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 CALN1Q9BXU9 219 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 SLC17A9Q9BYT1 436 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 TOR4AQ9NXH8 423 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 IPO11Q9UI26 975 aaKnown RBP14.31□□□□□ -0.12
TPM1-223ENST00000560445 FZD10Q9ULW2 581 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 FADS3Q9Y5Q0 445 aa14.31□□□□□ -0.12
TPM1-223ENST00000560445 BZW2Q9Y6E2 419 aaKnown RBP14.31□□□□□ -0.12
TPM1-223ENST00000560445 ANKRD11Q6UB99 2663 aaPredicted RBP14.3□□□□□ -0.12
TPM1-223ENST00000560445 ARHGAP42A6NI28 874 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 SRRM3A6NNA2 597 aaPredicted RBP14.3□□□□□ -0.12
TPM1-223ENST00000560445 C16orf96A6NNT2 1141 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 DAPK3O43293 454 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 PRLRP16471 622 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 ACVRL1P37023 503 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 DUSP3P51452 185 aaPredicted RBP14.3□□□□□ -0.12
TPM1-223ENST00000560445 NDST2P52849 883 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 KLHL30Q0D2K2 578 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 ELP6Q0PNE2 266 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 ZNF211Q13398 564 aaPredicted RBP14.3□□□□□ -0.12
TPM1-223ENST00000560445 PTK2BQ14289 1009 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 MYLK3Q32MK0 819 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 PPP1R15BQ5SWA1 713 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 GDPD4Q6W3E5 623 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 PARS2Q7L3T8 475 aaKnown RBP14.3□□□□□ -0.12
TPM1-223ENST00000560445 PTAR1Q7Z6K3 402 aaPredicted RBP14.3□□□□□ -0.12
TPM1-223ENST00000560445 LENG8Q96PV6 779 aaPredicted RBP14.3□□□□□ -0.12
TPM1-223ENST00000560445 TTYH3Q9C0H2 523 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 HSD3B7Q9H2F3 369 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 AIPL1Q9NZN9 384 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 DKK3Q9UBP4 350 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 MFHAS1Q9Y4C4 1052 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 TRPM6Q9BX84 2022 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 FRYQ5TBA9 3013 aa14.3□□□□□ -0.12
TPM1-223ENST00000560445 PTPRBP23467 1997 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 TCRBV5S1A1TA0A578 114 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 LRRC53A6NM62 1247 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 RASA4BC9J798 803 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 FAM72CH0Y354 149 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 EEF2KO00418 725 aaKnown RBP14.29□□□□□ -0.12
TPM1-223ENST00000560445 WNT9AO14904 365 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 RASA4O43374 803 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 PRPSAP2O60256 369 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 ZNF821O75541 412 aaPredicted RBP14.29□□□□□ -0.12
TPM1-223ENST00000560445 TMCC1O94876 653 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 TPM3P06753 285 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 JUPP14923 745 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 PRKCIP41743 596 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 RPL7AP62424 266 aaKnown RBP14.29□□□□□ -0.12
TPM1-223ENST00000560445 DAB2P98082 770 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 MAMLD1Q13495 774 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 SERINC3Q13530 473 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 ACAP1Q15027 740 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 SHBQ15464 509 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 FIGNQ5HY92 759 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 PRAMEF14Q5SWL7 426 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 TMCO4Q5TGY1 634 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 FAM72AQ5TYM5 149 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 PLEKHA7Q6IQ23 1121 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 FAM72DQ6L9T8 149 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 IRF2BP2Q7Z5L9 587 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 PARGQ86W56 976 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 FAM72BQ86X60 149 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 SPATS2Q86XZ4 545 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms