RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 LITAFQ99732 161 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 EGFL8Q99944 293 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 SLC7A10Q9NS82 523 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 SLC22A11Q9NSA0 550 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 ZNF224Q9NZL3 707 aa2.8□□□□□ -1.96
SPG11-222ENST00000560435 PQBP1O60828 265 aaKnown RBP2.79□□□□□ -1.96
SPG11-222ENST00000560435 LINC00271P0C7V0 271 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 DPP6P42658 865 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 GPR12P47775 334 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 FUT6P51993 359 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 LINC01547P58512 204 aaPredicted RBP2.79□□□□□ -1.96
SPG11-222ENST00000560435 DCAF6Q58WW2 860 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 ZC2HC1BQ5TFG8 222 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 TMEM268Q5VZI3 342 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 TBC1D9BQ66K14 1250 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 SUSD1Q6UWL2 747 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 RNF144BQ7Z419 303 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 NRSN1Q8IZ57 195 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 OR13A1Q8NGR1 328 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 FIG4Q92562 907 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 MMTAG2Q9BU76 263 aaKnown RBP2.79□□□□□ -1.96
SPG11-222ENST00000560435 VDAC3Q9Y277 283 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 PAM16Q9Y3D7 125 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 ZNF711Q9Y462 761 aa2.79□□□□□ -1.96
SPG11-222ENST00000560435 CGNL1Q0VF96 1302 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 hCG_2014768A0A024R1R8 64 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 CPED1A4D0V7 1026 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 AGAP5A6NIR3 686 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 CRLF1O75462 422 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 CLDN14O95500 239 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 HARSP12081 509 aaKnown RBP2.78□□□□□ -1.96
SPG11-222ENST00000560435 NPPBP16860 134 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 AKT1P31749 480 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 PMS2P11Q13670 270 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 SLC35G1Q2M3R5 365 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 GXYLT1Q4G148 440 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 ODR4Q5SWX8 454 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 AADACL2Q6P093 401 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 KIAA1324Q6UXG2 1013 aaKnown RBP2.78□□□□□ -1.96
SPG11-222ENST00000560435 CCDC129Q6ZRS4 1044 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 GTSCR1Q86UQ5 136 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 VPS52Q8N1B4 723 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 TBC1D22AQ8WUA7 517 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 TRIB2Q92519 343 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 LGALS12Q96DT0 336 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 LRFN5Q96NI6 719 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 CADM1Q9BY67 442 aaKnown RBP2.78□□□□□ -1.96
SPG11-222ENST00000560435 TRIM31Q9BZY9 425 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 PDE11AQ9HCR9 933 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 STARD7Q9NQZ5 370 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 SIX4Q9UIU6 781 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 LZTS1Q9Y250 596 aa2.78□□□□□ -1.96
SPG11-222ENST00000560435 MORC2Q9Y6X9 1032 aaPredicted RBP2.78□□□□□ -1.96
SPG11-222ENST00000560435 A0A096LPK6 155 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 A0A1W2PS18 150 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 GOLGA6CA6NDK9 693 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 GOLGA6BA6NDN3 693 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 NPIPB13A6NJU9 1138 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 NPIPB5A8MRT5 1133 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 NPIPB4C9JG80 1138 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 J3KR12 359 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 GRM8O00222 908 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 GOLGA6DP0CG33 693 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 CD53P19397 219 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 MYF6P23409 242 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 YWHAQP27348 245 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 PCP4P48539 62 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 PRIM2P49643 509 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 BRWD1-AS2P59051 145 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 CDK18Q07002 472 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 FAM27E3Q08E93 113 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 SREBF2Q12772 1141 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 ZNF155Q12901 538 aaPredicted RBP2.77□□□□□ -1.97
SPG11-222ENST00000560435 ALKBH1Q13686 389 aaKnown RBP2.77□□□□□ -1.97
SPG11-222ENST00000560435 RAB30Q15771 203 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 GFOD2Q3B7J2 385 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 ZNF484Q5JVG2 852 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 ARHGAP17Q68EM7 881 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 HIBCHQ6NVY1 386 aaPredicted RBP2.77□□□□□ -1.97
SPG11-222ENST00000560435 CADM4Q8NFZ8 388 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 C2CD4CQ8TF44 421 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 ZNF599Q96NL3 588 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 LRRC4Q9HBW1 653 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 TM7SF3Q9NS93 570 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 GOLGA6AQ9NYA3 693 aa2.77□□□□□ -1.97
SPG11-222ENST00000560435 GREB1LQ9C091 1923 aaPredicted RBP2.77□□□□□ -1.97
SPG11-222ENST00000560435 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.76□□□□□ -1.97
SPG11-222ENST00000560435 hDV102S1A0JD36 115 aa2.76□□□□□ -1.97
SPG11-222ENST00000560435 LILRA5A6NI73 299 aa2.76□□□□□ -1.97
SPG11-222ENST00000560435 ZNF587BE7ETH6 402 aa2.76□□□□□ -1.97
SPG11-222ENST00000560435 HNRNPDLO14979 420 aaKnown RBP2.76□□□□□ -1.97
SPG11-222ENST00000560435 PRSS1P07477 247 aa2.76□□□□□ -1.97
SPG11-222ENST00000560435 DHRS4L1P0CG22 281 aa2.76□□□□□ -1.97
SPG11-222ENST00000560435 SRCP12931 536 aa2.76□□□□□ -1.97
SPG11-222ENST00000560435 GYS1P13807 737 aa2.76□□□□□ -1.97
SPG11-222ENST00000560435 NFE4Q86UQ8 179 aa2.76□□□□□ -1.97
SPG11-222ENST00000560435 SCN4BQ8IWT1 228 aa2.76□□□□□ -1.97
SPG11-222ENST00000560435 KCNH5Q8NCM2 988 aa2.76□□□□□ -1.97
SPG11-222ENST00000560435 ADAD2Q8NCV1 583 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms