RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 CHST14Q8NCH0 376 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 OR14C36Q8NHC7 312 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 CASKIN2Q8WXE0 1202 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 VOPP1Q96AW1 172 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 ARHGEF26Q96DR7 871 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 KCTD15Q96SI1 283 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 NUP85Q9BW27 656 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 KLC2Q9H0B6 622 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 TNKS2Q9H2K2 1166 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 LRRC19Q9H756 370 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 ABHD10Q9NUJ1 306 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 IP6K2Q9UHH9 426 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 FCF1Q9Y324 198 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 ACTL7AQ9Y615 435 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 WASF2Q9Y6W5 498 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 ANKRD11Q6UB99 2663 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 PLXNB3Q9ULL4 1909 aa15.45■□□□□ 0.06
SNRPA1-210ENST00000560383 FAM47DPA6NHR8 397 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 RNF103O00237 685 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 EEF2KO00418 725 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 BNIP3LO60238 219 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 GSRP00390 522 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 NDST2P52849 883 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 C21orf59P57076 290 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 TAS2R38P59533 333 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 ARSIQ5FYB1 569 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 PIP5KL1Q5T9C9 394 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 AFMIDQ63HM1 303 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 LAYNQ6UX15 382 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 RFX8Q6ZV50 586 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 HMCESQ96FZ2 354 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 LRIG1Q96JA1 1093 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 HEPHQ9BQS7 1158 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 HDAC8Q9BY41 377 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 EBF2Q9HAK2 575 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 ZNHIT6Q9NWK9 470 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 TOR4AQ9NXH8 423 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 IL36AQ9UHA7 158 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 ANAPC7Q9UJX3 599 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 NBEAQ8NFP9 2946 aa15.44■□□□□ 0.06
SNRPA1-210ENST00000560383 A0A1B0GTQ1 180 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 SRRM3A6NNA2 597 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 H0Y8X5 98 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 PLK4O00444 970 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 KPNA3O00505 521 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 YKT6O15498 198 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 LEFTY1O75610 366 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 CAPNS1P04632 268 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 TPM1P09493 284 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 TCF4P15884 667 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 NUDT1P36639 197 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 CCNHP51946 323 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 SLC25A11Q02978 314 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 CCDC15Q0P6D6 951 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 DPYSQ14117 519 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 NEK5Q6P3R8 708 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 CCNI2Q6ZMN8 369 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 SLCO6A1Q86UG4 719 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 TRIM69Q86WT6 500 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 PNPLA1Q8N8W4 532 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 OR2AP1Q8NGE2 309 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 RHBDD1Q8TEB9 315 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 TEKT4Q8WW24 435 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 ARRDC3Q96B67 414 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 SLC6A18Q96N87 628 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 PREBQ9HCU5 417 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 CWC15Q9P013 229 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 UVRAGQ9P2Y5 699 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 HECAQ9UBI9 543 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 BTBD3Q9Y2F9 522 aa15.43■□□□□ 0.06
SNRPA1-210ENST00000560383 ITPR1Q14643 2758 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TBC1D3DA0A087WVF3 549 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TBC1D3IA0A087WXS9 549 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TBC1D3EA0A087X179 549 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TBC1D3KA0A087X1G2 549 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TBC1D3FA6NER0 549 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TBC1D3LB9A6J9 549 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 MYO1FO00160 1098 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TNFSF14O43557 240 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 BUB1O43683 1085 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TBC1D3HP0C7X1 549 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 RARAP10276 462 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 ERCC2P18074 760 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 ITGB7P26010 798 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 CD38P28907 300 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 ADKP55263 362 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 SNRPD1P62314 119 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 PPP2CBP62714 309 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 PPP2CAP67775 309 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TSR1Q2NL82 804 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 POM121L1PQ3SYA9 428 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 PPP6R3Q5H9R7 873 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 KCNT1Q5JUK3 1230 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TBC1D3GQ6DHY5 549 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TBC1D3CQ6IPX1 549 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 ERN2Q76MJ5 926 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 CNGA4Q8IV77 575 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 ARHGAP12Q8IWW6 846 aa15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 TBC1D3Q8IZP1 549 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-210ENST00000560383 ZNF564Q8TBZ8 553 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms