RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 KLRK1P26718 216 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 DCKP27707 260 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 ELK3P41970 407 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 SLC1A6P48664 564 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 ENTPD1P49961 510 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 C21orf59P57076 290 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 ATP6V0D1P61421 351 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 NAA20P61599 178 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 RNF4P78317 190 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CYP4A11Q02928 519 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 SOX4Q06945 474 aaPredicted RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CYP24A1Q07973 514 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 GRSF1Q12849 480 aaKnown RBP eCLIP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 KLF10Q13118 480 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 PPIL2Q13356 520 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 FLOT2Q14254 428 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 KCNJ11Q14654 390 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 ACAP1Q15027 740 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 SNRNP35Q16560 246 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 HADHQ16836 314 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 LRRC36Q1X8D7 754 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CEP55Q53EZ4 464 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 PIGGQ5H8A4 983 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 MDH1BQ5I0G3 518 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 RALGPS1Q5JS13 557 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 NBPF12Q5TAG4 269 aaPredicted RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 ANKRD22Q5VYY1 191 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 DPP8Q6V1X1 898 aaPredicted RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 GADL1Q6ZQY3 521 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CDHR3Q6ZTQ4 885 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 NEK10Q6ZWH5 1172 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 NIPA1Q7RTP0 329 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 AMIGO2Q86SJ2 522 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CENPSQ8N2Z9 138 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 AFAP1L2Q8N4X5 818 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CPSF7Q8N684 471 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 MFSD2AQ8NA29 543 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 MCUQ8NE86 351 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 RP9Q8TA86 221 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 SLC7A14Q8TBB6 771 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 PNPT1Q8TCS8 783 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 TFB1MQ8WVM0 346 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 KBTBD7Q8WVZ9 684 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 STARD8Q92502 1023 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 ATP2A3Q93084 1043 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 ISOC1Q96CN7 298 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 RTP4Q96DX8 246 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 PLEKHA8Q96JA3 519 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CCDC138Q96M89 665 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 KLF6Q99612 283 aaPredicted RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 LBHD1Q9BQE6 289 aaPredicted RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 NEURL2Q9BR09 285 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 GPATCH1Q9BRR8 931 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 C10orf88Q9H8K7 445 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 IFT122Q9HBG6 1241 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 GP6Q9HCN6 339 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CD209Q9NNX6 404 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 ALG13Q9NP73 1137 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CYP26B1Q9NR63 512 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 SLC38A7Q9NVC3 462 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 GID8Q9NWU2 228 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 PAK5Q9P286 719 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CHORDC1Q9UHD1 332 aaPredicted RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 DCDC2Q9UHG0 476 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 IPO11Q9UI26 975 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 APPL1Q9UKG1 709 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 DNAJC16Q9Y2G8 782 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 GIT1Q9Y2X7 761 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 TNPO3Q9Y5L0 923 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CDY2AQ9Y6F7 541 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 CDY1Q9Y6F8 540 aa6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 MYH9P35579 1960 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-209ENST00000560307 RGSL1A5PLK6 1076 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 C3orf70A6NLC5 250 aaPredicted RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 SLCO1B7G3V0H7 640 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 H0YCG3 227 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 TRIM38O00635 465 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ZNF195O14628 629 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 GAS7O60861 476 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 NOL3O60936 208 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 TADA2AO75478 443 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 GCATO75600 419 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 LRIG2O94898 1065 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 APOEP02649 317 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 HLA-DOAP06340 250 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 SNRPB2P08579 225 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 JMJD7P0C870 316 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 MCF2P10911 925 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 KRT10P13645 584 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ZNF26P17031 533 aaPredicted RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 TPSB2P20231 275 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ME2P23368 584 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 GLDCP23378 1020 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 POLD1P28340 1107 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 CDH5P33151 784 aaPredicted RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 HNRNPFP52597 415 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ABCE1P61221 599 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 YWHAGP61981 247 aaKnown RBP eCLIP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 GABREP78334 506 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms