RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ACCSLQ4AC99 568 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 CTXN3Q4LDR2 81 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 CFAP157Q5JU67 520 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 VARS2Q5ST30 1063 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 LIPMQ5VYY2 423 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 RFWD3Q6PCD5 774 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 EPGNQ6UW88 154 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 ARHGAP36Q6ZRI8 547 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 C14orf80Q86SX3 495 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 SETD3Q86TU7 594 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 SCUBE1Q8IWY4 988 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 PLD6Q8N2A8 252 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 TEX26Q8N6G2 289 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 C2CD4AQ8NCU7 369 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 RBM15BQ8NDT2 890 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 IPMKQ8NFU5 416 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 SPATA22Q8NHS9 363 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 STMN2Q93045 179 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 AZIN2Q96A70 460 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 TADA1Q96BN2 335 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 CMTM5Q96DZ9 223 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 MRGPRX2Q96LB1 330 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 CDK5RAP1Q96SZ6 601 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 EBF4Q9BQW3 602 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 CCDC28BQ9BUN5 200 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 GATA5Q9BWX5 397 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 DRC3Q9H069 523 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 ILKAPQ9H0C8 392 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 TASP1Q9H6P5 420 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 NOL6Q9H6R4 1146 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 GPAMQ9HCL2 828 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 TLR8Q9NR97 1041 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 MRGBPQ9NV56 204 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF358Q9NW07 568 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 UBP1Q9NZI7 540 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 IL1RAPL1Q9NZN1 696 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 ARMCX1Q9P291 453 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 STX18Q9P2W9 335 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 NKX1-2Q9UD57 310 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF212Q9UDV6 495 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 SRRDQ9UH36 339 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 FBXO5Q9UKT4 447 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 SLC39A10Q9ULF5 831 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 RIMKLBQ9ULI2 386 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 CORO1CQ9ULV4 474 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 ACOT9Q9Y305 439 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 KIAA0100Q14667 2235 aaKnown RBP8.19□□□□□ -1.1
SMAD3-212ENST00000559937 MICAL3Q7RTP6 2002 aa8.19□□□□□ -1.1
SMAD3-212ENST00000559937 KIAA1671Q9BY89 1806 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 PLXNA4Q9HCM2 1894 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 CCDC85CA6NKD9 419 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 TARM1B6A8C7 271 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 SLC7A4O43246 635 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 FKBP6O75344 327 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 PMPCBO75439 489 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 TADA2AO75478 443 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 VAPBO95292 243 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MOCS2O96007 188 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MT-CYBP00156 380 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-212ENST00000559937 GNRH1P01148 92 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 AHSGP02765 367 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 OR4Q2P0C623 313 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 SLC35E2BP0CK96 405 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 SELPP16109 830 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 STMN1P16949 149 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 FGFR3P22607 806 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 GLDCP23378 1020 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 YWHAQP27348 245 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 ARNTP27540 789 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 CPOXP36551 454 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 VHLP40337 213 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 SLC26A3P40879 764 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 RGS19P49795 217 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 SERPINH1P50454 418 aaKnown RBP8.18□□□□□ -1.1
SMAD3-212ENST00000559937 COPAP53621 1224 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 DNAJB13P59910 316 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MXRA7P84157 204 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 IRF9Q00978 393 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 BTKQ06187 659 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MBTPS1Q14703 1052 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 POU6F1Q14863 301 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 KPNB1Q14974 876 aaKnown RBP8.18□□□□□ -1.1
SMAD3-212ENST00000559937 PARP15Q460N3 678 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 C5orf22Q49AR2 442 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 ACSBG2Q5FVE4 666 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MS4A13Q5J8X5 152 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 TSTD2Q5T7W7 516 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MARC1Q5VT66 337 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 LRRC8EQ6NSJ5 796 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 ESRP1Q6NXG1 681 aaKnown RBP8.18□□□□□ -1.1
SMAD3-212ENST00000559937 AAGABQ6PD74 315 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 RAPH1Q70E73 1250 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MAVSQ7Z434 540 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 TTC8Q8TAM2 541 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 PXYLP1Q8TE99 480 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 FBXO32Q969P5 355 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 CCDC126Q96EE4 140 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 TSPAN17Q96FV3 270 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF419Q96HQ0 510 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms