RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 AQP9O43315 295 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 C1QL1O75973 258 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 NEBLO76041 1014 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 LSM8O95777 96 aaKnown RBP9.33□□□□□ -0.92
HDDC3-204ENST00000559834 MYF5P13349 255 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 THOP1P52888 689 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 SNRPD1P62314 119 aaKnown RBP9.33□□□□□ -0.92
HDDC3-204ENST00000559834 RAD51Q06609 339 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 RAPGEF1Q13905 1077 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 PDE1CQ14123 709 aaPredicted RBP9.33□□□□□ -0.92
HDDC3-204ENST00000559834 FGL2Q14314 439 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 NR0B2Q15466 257 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 CAMK4Q16566 473 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 CDKN3Q16667 212 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 VWA3BQ502W6 1294 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 ZNF805Q5CZA5 627 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 IGF2-ASQ6U949 168 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 TTC7BQ86TV6 843 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 FAM131BQ86XD5 332 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 XYLT1Q86Y38 959 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 IRF2BP1Q8IU81 584 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 DRC7Q8IY82 874 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 ZNF843Q8N446 348 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 DENND6BQ8NEG7 585 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 ZNF548Q8NEK5 533 aaPredicted RBP9.33□□□□□ -0.92
HDDC3-204ENST00000559834 WDR48Q8TAF3 677 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 LMX1AQ8TE12 382 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 C1QTNF7Q9BXJ2 289 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 OSBPL1AQ9BXW6 950 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 MAGEH1Q9H213 219 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 ZDHHC6Q9H6R6 413 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 OR12D3Q9UGF7 316 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 TMEM59LQ9UK28 342 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 FCF1Q9Y324 198 aaKnown RBP9.33□□□□□ -0.92
HDDC3-204ENST00000559834 PTPRQQ9UMZ3 2332 aa9.33□□□□□ -0.92
HDDC3-204ENST00000559834 LY6G6EA0A0G2JKS1 128 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 C16orf96A6NNT2 1141 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 GOLGA8SH3BPF8 625 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 RNF103O00237 685 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 KRIT1O00522 736 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 PES1O00541 588 aaKnown RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 RAD51BO15315 384 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 LZTS3O60299 673 aaPredicted RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 GADD45BO75293 160 aaPredicted RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 TCEA3O75764 348 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 ANXA6P08133 673 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 PNMA6AP0CW24 399 aaPredicted RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 RHOQP17081 205 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 TGM2P21980 687 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 ADRA1BP35368 520 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 FLT3P36888 993 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 MAPKAPK2P49137 400 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 PFN3P60673 137 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 YPEL5P62699 121 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 ARF5P84085 180 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 NRG1Q02297 640 aaPredicted RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 VAC14Q08AM6 782 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 DEFB133Q30KQ1 61 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 MYLK3Q32MK0 819 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 ARHGAP40Q5TG30 622 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 KLHDC7AQ5VTJ3 777 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 TAF3Q5VWG9 929 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 RWDD4Q6NW29 188 aaKnown RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 ESRP1Q6NXG1 681 aaKnown RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 RBM44Q6ZP01 1051 aaKnown RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 PARS2Q7L3T8 475 aaKnown RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 EFL1Q7Z2Z2 1120 aaKnown RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 ARL14Q8N4G2 192 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 OR2AP1Q8NGE2 309 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 SCG3Q8WXD2 468 aaKnown RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 NAT6Q93015 286 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 TBATAQ96M53 351 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 CFAP57Q96MR6 1250 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 SLC46A1Q96NT5 459 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 KLF6Q99612 283 aaPredicted RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 TUBGCP2Q9BSJ2 902 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 SLC13A1Q9BZW2 595 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 TM6SF2Q9BZW4 377 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 TMPRSS4Q9NRS4 437 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 ZNF212Q9UDV6 495 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 AJAP1Q9UKB5 411 aaPredicted RBP9.32□□□□□ -0.92
HDDC3-204ENST00000559834 SATB2Q9UPW6 733 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 PCDHGA8Q9Y5G5 932 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 U3KQA8 63 aa9.32□□□□□ -0.92
HDDC3-204ENST00000559834 IGSF10Q6WRI0 2623 aa9.31□□□□□ -0.92
HDDC3-204ENST00000559834 ZSCAN5CA6NGD5 496 aaPredicted RBP9.31□□□□□ -0.92
HDDC3-204ENST00000559834 TMEM110-MUSTN1A8MSY1 372 aa9.31□□□□□ -0.92
HDDC3-204ENST00000559834 TM7SF2O76062 418 aa9.31□□□□□ -0.92
HDDC3-204ENST00000559834 GSRP00390 522 aa9.31□□□□□ -0.92
HDDC3-204ENST00000559834 PLA2G2AP14555 144 aa9.31□□□□□ -0.92
HDDC3-204ENST00000559834 ERCC5P28715 1186 aaPredicted RBP9.31□□□□□ -0.92
HDDC3-204ENST00000559834 SDC4P31431 198 aa9.31□□□□□ -0.92
HDDC3-204ENST00000559834 ACVRL1P37023 503 aa9.31□□□□□ -0.92
HDDC3-204ENST00000559834 BLKP51451 505 aa9.31□□□□□ -0.92
HDDC3-204ENST00000559834 ADKP55263 362 aaKnown RBP9.31□□□□□ -0.92
HDDC3-204ENST00000559834 UBE2HP62256 183 aa9.31□□□□□ -0.92
HDDC3-204ENST00000559834 ATP11AP98196 1134 aa9.31□□□□□ -0.92
HDDC3-204ENST00000559834 EIF2B5Q13144 721 aaKnown RBP9.31□□□□□ -0.92
HDDC3-204ENST00000559834 PRRT3Q5FWE3 981 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms