RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CCDC122Q5T0U0 273 aa12.8□□□□□ -0.36
LRRC28-214ENST00000559433 ATXN7L2Q5T6C5 722 aaPredicted RBP12.8□□□□□ -0.36
LRRC28-214ENST00000559433 ALKBH5Q6P6C2 394 aaKnown RBP12.8□□□□□ -0.36
LRRC28-214ENST00000559433 RFX8Q6ZV50 586 aa12.8□□□□□ -0.36
LRRC28-214ENST00000559433 CYP4V2Q6ZWL3 525 aaPredicted RBP12.8□□□□□ -0.36
LRRC28-214ENST00000559433 PSTKQ8IV42 348 aaKnown RBP12.8□□□□□ -0.36
LRRC28-214ENST00000559433 PLPP6Q8IY26 295 aa12.8□□□□□ -0.36
LRRC28-214ENST00000559433 OR2AP1Q8NGE2 309 aa12.8□□□□□ -0.36
LRRC28-214ENST00000559433 CASKIN2Q8WXE0 1202 aa12.8□□□□□ -0.36
LRRC28-214ENST00000559433 CELF6Q96J87 481 aaKnown RBP12.8□□□□□ -0.36
LRRC28-214ENST00000559433 GDAP1L1Q96MZ0 367 aa12.8□□□□□ -0.36
LRRC28-214ENST00000559433 CDC6Q99741 560 aa12.8□□□□□ -0.36
LRRC28-214ENST00000559433 NUP85Q9BW27 656 aa12.8□□□□□ -0.36
LRRC28-214ENST00000559433 APOBEC2Q9Y235 224 aaKnown RBP12.8□□□□□ -0.36
LRRC28-214ENST00000559433 PCDHGB2Q9Y5G2 931 aa12.8□□□□□ -0.36
LRRC28-214ENST00000559433 CABIN1Q9Y6J0 2220 aa12.8□□□□□ -0.36
LRRC28-214ENST00000559433 A0A1W2PQU0 124 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 A0A1W2PR77 199 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 H0Y8X5 98 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 PCDH8O95206 1070 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 IGSF6O95976 241 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 CYP1A2P05177 515 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 TPM1P09493 284 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 ADRB3P13945 408 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 HNRNPH3P31942 346 aaKnown RBP12.79□□□□□ -0.36
LRRC28-214ENST00000559433 GKP32189 559 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 EIF4A3P38919 411 aaKnown RBP12.79□□□□□ -0.36
LRRC28-214ENST00000559433 CCT8P50990 548 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 NDST2P52849 883 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 IL9RQ01113 521 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 PIGHQ14442 188 aaPredicted RBP12.79□□□□□ -0.36
LRRC28-214ENST00000559433 SMTNL2Q2TAL5 461 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 MYLK3Q32MK0 819 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 NEK5Q6P3R8 708 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 FBXL19Q6PCT2 694 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 PARS2Q7L3T8 475 aaKnown RBP12.79□□□□□ -0.36
LRRC28-214ENST00000559433 HORMAD1Q86X24 394 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 VSTM4Q8IW00 320 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 NETO2Q8NC67 525 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 HSPH1Q92598 858 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 KLK6Q92876 244 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 ARHGEF26Q96DR7 871 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 BTBD6Q96KE9 485 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 DNAJC7Q99615 494 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 LRRC19Q9H756 370 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 ZWILCHQ9H900 591 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 GDF3Q9NR23 364 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
LRRC28-214ENST00000559433 UBA2Q9UBT2 640 aaPredicted RBP12.79□□□□□ -0.36
LRRC28-214ENST00000559433 IP6K2Q9UHH9 426 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 ANAPC7Q9UJX3 599 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 DMTF1Q9Y222 760 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 ACACBO00763 2458 aa12.79□□□□□ -0.36
LRRC28-214ENST00000559433 SHROOM3Q8TF72 1996 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 ARHGAP42A6NI28 874 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 PRAMEF26H0Y7S4 382 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 H3BRJ5 948 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 TLR4O00206 839 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 SLC31A1O15431 190 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 FLRT2O43155 660 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 POP4O95707 220 aaKnown RBP12.78□□□□□ -0.36
LRRC28-214ENST00000559433 UGT2B4P06133 528 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 TCF4P15884 667 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 PRLRP16471 622 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 ERCC2P18074 760 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 IL1R2P27930 398 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 GRK6P43250 576 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 ARRB1P49407 418 aaPredicted RBP12.78□□□□□ -0.36
LRRC28-214ENST00000559433 ZNF135P52742 658 aaPredicted RBP12.78□□□□□ -0.36
LRRC28-214ENST00000559433 FAM193AP78312 1265 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 RAD51Q06609 339 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 ZNF284Q2VY69 593 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 INO80DQ53TQ3 878 aaPredicted RBP12.78□□□□□ -0.36
LRRC28-214ENST00000559433 ZNF805Q5CZA5 627 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 NIPA2Q8N8Q9 360 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 OR8K1Q8NGG5 319 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 LRIG1Q96JA1 1093 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 MYOCQ99972 504 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 OSBPL1AQ9BXW6 950 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 SLC39A8Q9C0K1 460 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 DEF6Q9H4E7 631 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.78□□□□□ -0.36
LRRC28-214ENST00000559433 ZNHIT6Q9NWK9 470 aaKnown RBP12.78□□□□□ -0.36
LRRC28-214ENST00000559433 CWC15Q9P013 229 aaKnown RBP12.78□□□□□ -0.36
LRRC28-214ENST00000559433 PCOLCE2Q9UKZ9 415 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 NENFQ9UMX5 172 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 CA5BQ9Y2D0 317 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 CEP295Q9C0D2 2601 aa12.78□□□□□ -0.36
LRRC28-214ENST00000559433 GOLGA8CPA6NN73 597 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 C16orf96A6NNT2 1141 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 J3KR12 359 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 MYO1FO00160 1098 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 DFFAO00273 331 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 NEMP1O14524 444 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 PRAMEF11O60813 436 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 ITGAVP06756 1048 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 ARL4AP40617 200 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 SSR1P43307 286 aaKnown RBP12.77□□□□□ -0.37
LRRC28-214ENST00000559433 HCAR3P49019 387 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 PAPOLAP51003 745 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms