RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 TSPAN6O43657 245 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 PRAMEF11O60813 436 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 RNGTTO60942 597 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 NEBLO76041 1014 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 TMCC1O94876 653 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 PROSCO94903 275 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 IGSF6O95976 241 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 IGHV4-34P06331 123 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CTSLP07711 333 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 TMEM253P0C7T8 217 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 RARAP10276 462 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CEACAM1P13688 526 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 ADRB3P13945 408 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 MX2P20592 715 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CSRP1P21291 193 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 ITGB7P26010 798 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CD38P28907 300 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 SERPINA4P29622 427 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 MAT2AP31153 395 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 AKT2P31751 481 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 MAN1A1P33908 653 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CYLC1P35663 651 aaPredicted RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 HSPA9P38646 679 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 NOP2P46087 812 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 CSNK1EP49674 416 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 PAPOLAP51003 745 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 NOVA1P51513 510 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 CDH6P55285 790 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 POLR2LP62875 67 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 RPS21P63220 83 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 IL10RBQ08334 325 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 NSUN2Q08J23 767 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNX1-205ENST00000559339 ZNF252P-AS1Q0IIN9 211 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CNTN1Q12860 1018 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 GRIK2Q13002 908 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CA9Q16790 459 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 KIF19Q2TAC6 998 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 ASTE1Q2TB18 679 aaPredicted RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 HLA-BQ31612 363 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 MYLK3Q32MK0 819 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 INAVAQ3KP66 663 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 HS1BP3Q53T59 392 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 PPM1JQ5JR12 505 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 AGBL4Q5VU57 503 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 KIAA1161Q6NSJ0 714 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 PSAPL1Q6NUJ1 521 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 ERAP2Q6P179 960 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 GDPD4Q6W3E5 623 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 LEKR1Q6ZMV7 388 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 POLNQ7Z5Q5 900 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 TTC7BQ86TV6 843 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 IQCHQ86VS3 1027 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 TRIM69Q86WT6 500 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 TMTC1Q8IUR5 882 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 TXLNBQ8N3L3 684 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 OXR1Q8N573 874 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 ATPAF2Q8N5M1 289 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 ARFGAP1Q8N6T3 406 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 OR6K2Q8NGY2 324 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 SLC35G2Q8TBE7 412 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 FAM174AQ8TBP5 190 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 RFFLQ8WZ73 363 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 MRFAP1L1Q96HT8 127 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CELF6Q96J87 481 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 BTBD6Q96KE9 485 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CALR3Q96L12 384 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 ZNF641Q96N77 438 aaPredicted RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 ZNF830Q96NB3 372 aaPredicted RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 ZNF599Q96NL3 588 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CSPG4P5Q96PW8 444 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 PANX2Q96RD6 677 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 TUBGCP5Q96RT8 1024 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 PEBP4Q96S96 227 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 KCTD15Q96SI1 283 aaPredicted RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 CHP1Q99653 195 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 ZNF670Q9BS34 389 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CINPQ9BW66 212 aaPredicted RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 C1QTNF7Q9BXJ2 289 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CALN1Q9BXU9 219 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 MAK16Q9BXY0 300 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 MAGEB5Q9BZ81 275 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CPEB1Q9BZB8 566 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 TRIM7Q9C029 511 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 SLC39A8Q9C0K1 460 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 GAREM1Q9H706 876 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 LRRC19Q9H756 370 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 ATP13A3Q9H7F0 1226 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 TM9SF3Q9HD45 589 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 GDF3Q9NR23 364 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 TM7SF3Q9NS93 570 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 SPTLC3Q9NUV7 552 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 DNAAF2Q9NVR5 837 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 GPATCH2LQ9NWQ4 482 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 CWC15Q9P013 229 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 SEPT3Q9UH03 358 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 IPO11Q9UI26 975 aaKnown RBP4.44□□□□□ -1.7
SNX1-205ENST00000559339 SARDHQ9UL12 918 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 NEU3Q9UQ49 428 aa4.44□□□□□ -1.7
SNX1-205ENST00000559339 ANKRD6Q9Y2G4 727 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms