RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 PABPC1LQ4VXU2 614 aaKnown RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 HABP4Q5JVS0 413 aaKnown RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 STXBP5Q5T5C0 1151 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 CDHR3Q6ZTQ4 885 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 PIGWQ7Z7B1 504 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 DNAAF3Q8N9W5 541 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 IPMKQ8NFU5 416 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 ARRDC2Q8TBH0 407 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 ZNF669Q96BR6 464 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 ALKBH8Q96BT7 664 aaKnown RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 TCEAL4Q96EI5 215 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 APOPT1Q96IL0 206 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 MAGEB18Q96M61 343 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 ZNF778Q96MU6 729 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 GCNAQ96QF7 691 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 MCMBPQ9BTE3 642 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 KIFC1Q9BW19 673 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 IL22Q9GZX6 179 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 NACA2Q9H009 215 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 CHRAC1Q9NRG0 131 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 SLC17A7Q9P2U7 560 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 IKBKGQ9Y6K9 419 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 FAM169AQ9Y6X4 670 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 MUSKO15146 869 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 PSMD3O43242 534 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 MT-ND3P03897 115 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 DHRS4L1P0CG22 281 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 ERVK-10P10266 1014 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 PYGBP11216 843 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 POU3F3P20264 500 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 SLC11A2P49281 568 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 RENBPP51606 427 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 MAXP61244 160 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 MGAT5Q09328 741 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 MSLNQ13421 630 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 ADAM15Q13444 863 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 NAB1Q13506 487 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 SLC5A9Q2M3M2 681 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 TXNDC8Q6A555 127 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 CGB2Q6NT52 195 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 ANKRD54Q6NXT1 300 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 C6orf89Q6UWU4 347 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 PACS1Q6VY07 963 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 TMEM184AQ6ZMB5 413 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 RGS9BPQ6ZS82 235 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 LINC00523Q86TU6 105 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 TCP10LQ8TDR4 215 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 PABPC5Q96DU9 382 aaKnown RBP13.14□□□□□ -0.31
SMAD3-207ENST00000558763 CYP2S1Q96SQ9 504 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 FICDQ9BVA6 458 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 RETREG1Q9H6L5 497 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 SP110Q9HB58 689 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 NT5MQ9NPB1 228 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 SAMD15Q9P1V8 674 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 NOTCH4Q99466 2003 aa13.14□□□□□ -0.31
SMAD3-207ENST00000558763 TCP11X1B4DZS4 312 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 ATP9BO43861 1147 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 GJB3O75712 270 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 KRT37O76014 449 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 ZWINTO95229 277 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 ADRA1DP25100 572 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 NMBRP28336 390 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 CDC25CP30307 473 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 GEMP55040 296 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 CDH4P55283 916 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 SMAD1Q15797 465 aaKnown RBP13.13□□□□□ -0.31
SMAD3-207ENST00000558763 ADGRF1Q5T601 910 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 MARC1Q5VT66 337 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 ALG1LQ6GMV1 187 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 SYCE2Q6PIF2 218 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 TIFABQ6ZNK6 161 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 CCDC117Q8IWD4 279 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-207ENST00000558763 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMAD3-207ENST00000558763 DYDC1Q8WWB3 177 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 ING5Q8WYH8 240 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 MRPS31Q92665 395 aaKnown RBP13.13□□□□□ -0.31
SMAD3-207ENST00000558763 CDX2Q99626 313 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-207ENST00000558763 ARNT2Q9HBZ2 717 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 MKS1Q9NXB0 559 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 CLEC1BQ9P126 229 aa13.13□□□□□ -0.31
SMAD3-207ENST00000558763 TM9SF1O15321 606 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 PMPCBO75439 489 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 ALDOAP04075 364 aaKnown RBP13.12□□□□□ -0.31
SMAD3-207ENST00000558763 IRF1P10914 325 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 CHRNA4P43681 627 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 SERPINB9P50453 376 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 EPHA5P54756 1037 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 WNT3AP56704 352 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 DSC2Q02487 901 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 GNA12Q03113 381 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 MPP3Q13368 585 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 TEAD2Q15562 447 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 CCDC85BQ15834 202 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-207ENST00000558763 PDK4Q16654 411 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 CXorf57Q6NSI4 855 aaKnown RBP13.12□□□□□ -0.31
SMAD3-207ENST00000558763 LVRNQ6Q4G3 990 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 Q6ZNB5 142 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 DEFB123Q8N688 67 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 MAB21L3Q8N8X9 362 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms