RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 APOL1O14791 398 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 MAFKO60675 156 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 LRP3O75074 770 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 GARSP41250 739 aaKnown RBP12.54□□□□□ -0.4
SMAD3-205ENST00000558428 DPP6P42658 865 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 MARCKSL1P49006 195 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 ADPRHP54922 357 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 CCZ1BP86790 482 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 CCZ1P86791 482 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-205ENST00000558428 GBE1Q04446 702 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 CCDC15Q0P6D6 951 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 GALNT2Q10471 571 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 RFTN1Q14699 578 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-205ENST00000558428 LBRQ14739 615 aaKnown RBP12.54□□□□□ -0.4
SMAD3-205ENST00000558428 WDR45BQ5MNZ6 344 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 AGBL4Q5VU57 503 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 DCAF12L1Q5VU92 463 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 NCEH1Q6PIU2 408 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 MFSD7Q6UXD7 560 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 LRRC49Q8IUZ0 686 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 SYT12Q8IV01 421 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 KATNAL2Q8IYT4 538 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 TSEN2Q8NCE0 465 aaKnown RBP12.54□□□□□ -0.4
SMAD3-205ENST00000558428 NSMCE1Q8WV22 266 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 SNX19Q92543 992 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 KRT35Q92764 455 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 ARRDC3Q96B67 414 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 LRIG1Q96JA1 1093 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 ZNF599Q96NL3 588 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 TSGA10Q9BZW7 698 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 PCED1AQ9H1Q7 454 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 SMOC1Q9H4F8 434 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 PARD6AQ9NPB6 346 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 SEMA4GQ9NTN9 838 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 CACNA1EQ15878 2313 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 KNL1Q8NG31 2342 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 TRPM6Q9BX84 2022 aa12.54□□□□□ -0.4
SMAD3-205ENST00000558428 INSIG1O15503 277 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 SLC7A4O43246 635 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 PLRG1O43660 514 aaKnown RBP12.53□□□□□ -0.4
SMAD3-205ENST00000558428 KRT86O43790 486 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 FSBPO95073 299 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 ZRANB2O95218 330 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMAD3-205ENST00000558428 UGT2B4P06133 528 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 ZFXP17010 805 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-205ENST00000558428 MX2P20592 715 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 ITGB7P26010 798 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 MAOBP27338 520 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 CTNNA1P35221 906 aaKnown RBP12.53□□□□□ -0.4
SMAD3-205ENST00000558428 CDKN2BP42772 138 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 DYNLT1P63172 113 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 SLC10A7Q0GE19 358 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 SLC10A2Q12908 348 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-205ENST00000558428 ZNF235Q14590 738 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 LLGL1Q15334 1064 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 PLA2G2CQ5R387 149 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 KAZNQ674X7 775 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 KIAA0895LQ68EN5 471 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 SLC9A4Q6AI14 798 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 SPOCD1Q6ZMY3 1216 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 ERN2Q76MJ5 926 aaKnown RBP12.53□□□□□ -0.4
SMAD3-205ENST00000558428 CCDC50Q8IVM0 306 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 KIAA2013Q8IYS2 634 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 SYCE1Q8N0S2 351 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 BBS5Q8N3I7 341 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 GPR161Q8N6U8 529 aaKnown RBP12.53□□□□□ -0.4
SMAD3-205ENST00000558428 PLD5Q8N7P1 536 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 LRRC57Q8N9N7 239 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 OR2T34Q8NGX1 318 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 FAM131CQ96AQ9 280 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 RBM41Q96IZ5 413 aaKnown RBP12.53□□□□□ -0.4
SMAD3-205ENST00000558428 ZNF830Q96NB3 372 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-205ENST00000558428 OSBPL1AQ9BXW6 950 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 MIR1-1HGQ9H1L0 117 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 VPS45Q9NRW7 570 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 TMEM74BQ9NUR3 256 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 DTLQ9NZJ0 730 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 AMFRQ9UKV5 643 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 GUCA1BQ9UMX6 200 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 HEY1Q9Y5J3 304 aa12.53□□□□□ -0.4
SMAD3-205ENST00000558428 TBC1D3DA0A087WVF3 549 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TBC1D3IA0A087WXS9 549 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TBC1D3EA0A087X179 549 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TBC1D3KA0A087X1G2 549 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 CCDC66A2RUB6 948 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TBC1D3FA6NER0 549 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TBC1D3LB9A6J9 549 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 PIGNO95427 931 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 PEX11BO96011 259 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 PTMAP06454 111 aaKnown RBP12.52□□□□□ -0.41
SMAD3-205ENST00000558428 CCDC175P0C221 793 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TBC1D3HP0C7X1 549 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 ZNF806P0C7X5 589 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 KRT10P13645 584 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 TGM1P22735 817 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 CTNNA2P26232 953 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 RGRP47804 291 aa12.52□□□□□ -0.41
SMAD3-205ENST00000558428 RENBPP51606 427 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms