RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 NCKIPSDQ9NZQ3 722 aa13.85□□□□□ -0.19
SNRPA1-204ENST00000558020 DNAI1Q9UI46 699 aa13.85□□□□□ -0.19
SNRPA1-204ENST00000558020 ZFR2Q9UPR6 939 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-204ENST00000558020 FCF1Q9Y324 198 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-204ENST00000558020 FADS3Q9Y5Q0 445 aa13.85□□□□□ -0.19
SNRPA1-204ENST00000558020 LAMA5O15230 3695 aa13.85□□□□□ -0.19
SNRPA1-204ENST00000558020 DOCK4Q8N1I0 1966 aa13.85□□□□□ -0.19
SNRPA1-204ENST00000558020 EIF4E1BA6NMX2 242 aaKnown RBP13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 C16orf96A6NNT2 1141 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 KRIT1O00522 736 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 SCAMP1O15126 338 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 FFAR2O15552 330 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 KDELR3O43731 214 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 PIAS2O75928 621 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 GSRP00390 522 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 CHRNB2P17787 502 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 GPD1P21695 349 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 RFC1P35251 1148 aaPredicted RBP13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 ACVRL1P37023 503 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 ANP32AP39687 249 aaKnown RBP13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 CLDN2P57739 230 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 MYLK3Q32MK0 819 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 PTAR1Q7Z6K3 402 aaPredicted RBP13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 PHLDB2Q86SQ0 1253 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 TTC7BQ86TV6 843 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 OR2AP1Q8NGE2 309 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 FAM172AQ8WUF8 416 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 CASKIN2Q8WXE0 1202 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 ASB12Q8WXK4 309 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 NTAN1Q96AB6 310 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 DCBLD2Q96PD2 775 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 GBP4Q96PP9 640 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 C1QTNF7Q9BXJ2 289 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 C1QTNF2Q9BXJ5 285 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 TM6SF2Q9BZW4 377 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 ANO10Q9NW15 660 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 DOCK9Q9BZ29 2069 aa13.84□□□□□ -0.19
SNRPA1-204ENST00000558020 SPTY2D1-AS1A0A0U1RR47 76 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 SIGLEC16A6NMB1 481 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 GOLGA6L22H0YM25 854 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 BUB1O43683 1085 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 LRIG2O94898 1065 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 GP1BAP07359 652 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 CKMT1AP12532 417 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 UNGP13051 313 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 ACTN2P35609 894 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 ABCG1P45844 678 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 KLK7P49862 253 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 AIF1P55008 147 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 YBEYP58557 167 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 UBXN1Q04323 297 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 COL9A2Q14055 689 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 PTK2BQ14289 1009 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 CLEC16AQ2KHT3 1053 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 EFHC2Q5JST6 749 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 ARTNQ5T4W7 220 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 MANEALQ5VSG8 457 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 SCYL2Q6P3W7 929 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 KYAT3Q6YP21 454 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 GCNT7Q6ZNI0 430 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 NLRP14Q86W24 1093 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 PARGQ86W56 976 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 PHF13Q86YI8 300 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 DCBLD1Q8N8Z6 715 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 C3orf20Q8ND61 904 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 JOSD2Q8TAC2 188 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 BTN2A2Q8WVV5 523 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 BMFQ96LC9 184 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 LMBRD1Q9NUN5 540 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 SEPT11Q9NVA2 429 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 UCKL1Q9NWZ5 548 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 CSNK1G3Q9Y6M4 447 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 TRPM6Q9BX84 2022 aa13.83□□□□□ -0.2
SNRPA1-204ENST00000558020 ARID1BQ8NFD5 2236 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 POM121BA6NF01 834 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 IGLON5A6NGN9 336 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 LRRC10BA6NIK2 292 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 FAM72CH0Y354 149 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 MT-CO3P00414 261 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 CSF2P04141 144 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 EPHB2P29323 1055 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 SUOXP51687 545 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 ZNF143P52747 638 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 THOP1P52888 689 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 COPB1P53618 953 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 HDAC4P56524 1084 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 GSCP56915 257 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 INSM1Q01101 510 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 MYL5Q02045 173 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 C1QBPQ07021 282 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 INO80DQ53TQ3 878 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 FAM72AQ5TYM5 149 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 FAM72DQ6L9T8 149 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 PPP1R2P3Q6NXS1 205 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 WDR59Q6PJI9 974 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 GDPD4Q6W3E5 623 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 PARS2Q7L3T8 475 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 TMC6Q7Z403 805 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 FAM72BQ86X60 149 aa13.82□□□□□ -0.2
SNRPA1-204ENST00000558020 FAM181AQ8N9Y4 354 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms