RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.55□□□□□ -0.08
USP3-205ENST00000557884 SLC36A4Q6YBV0 504 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 LPCAT2Q7L5N7 544 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 C11orf74Q86VG3 221 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 LRRC49Q8IUZ0 686 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 TMIEQ8NEW7 156 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 ARRDC3Q96B67 414 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 HES6Q96HZ4 224 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 LGMNQ99538 433 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 OSBPL8Q9BZF1 889 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 NEUROG2Q9H2A3 272 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 SEMA4AQ9H3S1 761 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 WSB2Q9NYS7 404 aaPredicted RBP14.55□□□□□ -0.08
USP3-205ENST00000557884 PYCARDQ9ULZ3 195 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 SCML1Q9UN30 329 aa14.55□□□□□ -0.08
USP3-205ENST00000557884 PRR23AA6NEV1 266 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 FAM47DPA6NHR8 397 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 PROB1E7EW31 1015 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 RHOBTB1O94844 696 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 POP4O95707 220 aaKnown RBP14.54□□□□□ -0.08
USP3-205ENST00000557884 IGLV3-19P01714 112 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 UGT2B4P06133 528 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 TGM2P21980 687 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 DRD3P35462 400 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 MMP13P45452 471 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 DHPSP49366 369 aaPredicted RBP14.54□□□□□ -0.08
USP3-205ENST00000557884 COPS2P61201 443 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 MAXP61244 160 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 SFSWAPQ12872 951 aaKnown RBP14.54□□□□□ -0.08
USP3-205ENST00000557884 PDK1Q15118 436 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 MARC1Q5VT66 337 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 DCAF12L1Q5VU92 463 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 PMS2CLQ68D20 193 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 USP30Q70CQ3 517 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 ASCL5Q7RTU5 278 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 REXO1L1PQ8IX06 675 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 PLPP6Q8IY26 295 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 CCDC13Q8IYE1 715 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 PGBD5Q8N414 524 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 HDAC11Q96DB2 347 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 ZNF419Q96HQ0 510 aaPredicted RBP14.54□□□□□ -0.08
USP3-205ENST00000557884 OLFM3Q96PB7 478 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 BTBD1Q9H0C5 482 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 NT5MQ9NPB1 228 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 DYRK4Q9NR20 520 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 SEPT10Q9P0V9 454 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 TTLL3Q9Y4R7 772 aa14.54□□□□□ -0.08
USP3-205ENST00000557884 KCNK1O00180 336 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 PPP1R12AO14974 1030 aaPredicted RBP14.53□□□□□ -0.08
USP3-205ENST00000557884 MATN3O15232 486 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 ZSCAN12O43309 604 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 PIGNO95427 931 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 SEMA4FO95754 770 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 CCNCP24863 283 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 CETN2P41208 172 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 PTGER3P43115 390 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 SCNN1BP51168 640 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 RAD51Q06609 339 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 AP1B1Q10567 949 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 RPS6KA1Q15418 735 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 MEI1Q5TIA1 1274 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 TIGD7Q6NT04 549 aaPredicted RBP14.53□□□□□ -0.08
USP3-205ENST00000557884 GDPD4Q6W3E5 623 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 BBS12Q6ZW61 710 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 SRLQ86TD4 932 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 BBS5Q8N3I7 341 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.53□□□□□ -0.08
USP3-205ENST00000557884 TRIM58Q8NG06 486 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 OR14C36Q8NHC7 312 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 VOPP1Q96AW1 172 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 FAM122AQ96E09 287 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 PPP1R16AQ96I34 528 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 ZC3H10Q96K80 434 aaKnown RBP14.53□□□□□ -0.08
USP3-205ENST00000557884 HSPA12BQ96MM6 686 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 KLHL32Q96NJ5 620 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 TSGA13Q96PP4 275 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 PSKH2Q96QS6 385 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 CEP41Q9BYV8 373 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 C6orf106Q9H6K1 298 aaPredicted RBP14.53□□□□□ -0.08
USP3-205ENST00000557884 SGK2Q9HBY8 427 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 FZD4Q9ULV1 537 aa14.53□□□□□ -0.08
USP3-205ENST00000557884 ATXN2Q99700 1313 aaKnown RBP14.52□□□□□ -0.08
USP3-205ENST00000557884 USP27XA6NNY8 438 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 NEBLO76041 1014 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 JCHAINP01591 159 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 CCNB1P14635 433 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 ITGB7P26010 798 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 PTPN7P35236 360 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 NR2C2P49116 596 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 RENBPP51606 427 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 ADPRHP54922 357 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 PPIDQ08752 370 aaKnown RBP14.52□□□□□ -0.09
USP3-205ENST00000557884 ITKQ08881 620 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 HNRNPDQ14103 355 aaKnown RBP14.52□□□□□ -0.09
USP3-205ENST00000557884 CCDC6Q16204 474 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 PIP5KL1Q5T9C9 394 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 AGBL4Q5VU57 503 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 LAIR1Q6GTX8 287 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 NCEH1Q6PIU2 408 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 ERN2Q76MJ5 926 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms