RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 STK33Q9BYT3 514 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 RETREG1Q9H6L5 497 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 OR12D3Q9UGF7 316 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 CSNK1G3Q9Y6M4 447 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 SHROOM3Q8TF72 1996 aa16.23■□□□□ 0.19
SCFD1-224ENST00000557713 TEX51A0A1B0GUA7 166 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 IGLON5A6NGN9 336 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 FPGTO14772 594 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 SPINT1O43278 529 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 LZTS3O60299 673 aaPredicted RBP16.22■□□□□ 0.19
SCFD1-224ENST00000557713 USP12O75317 370 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 CSO75390 466 aaKnown RBP16.22■□□□□ 0.19
SCFD1-224ENST00000557713 DXOO77932 396 aaKnown RBP16.22■□□□□ 0.19
SCFD1-224ENST00000557713 MPOP05164 745 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 ERCC5P28715 1186 aaPredicted RBP16.22■□□□□ 0.19
SCFD1-224ENST00000557713 GKP32189 559 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 ABL2P42684 1182 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 LSSP48449 732 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 ATP11AP98196 1134 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 SGCGQ13326 291 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 TPRG1LQ5T0D9 272 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 NAA35Q5VZE5 725 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 NLRP14Q86W24 1093 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 PARGQ86W56 976 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 LSMEM2Q8N112 164 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 MSANTD4Q8NCY6 345 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 ZNF248Q8NDW4 579 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 EPS8L1Q8TE68 723 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 ARHGEF2Q92974 986 aaKnown RBP16.22■□□□□ 0.19
SCFD1-224ENST00000557713 RAB7BQ96AH8 199 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 MAGEB5Q9BZ81 275 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 ABCG4Q9H172 646 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 OSBPL2Q9H1P3 480 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 ZDHHC6Q9H6R6 413 aa16.22■□□□□ 0.19
SCFD1-224ENST00000557713 IPO11Q9UI26 975 aaKnown RBP16.22■□□□□ 0.19
SCFD1-224ENST00000557713 F8VZ95 297 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 FAM72CH0Y354 149 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 CYP1A1P04798 512 aaPredicted RBP16.21■□□□□ 0.19
SCFD1-224ENST00000557713 RHOQP17081 205 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 ETFBP38117 255 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 PCBP4P57723 403 aaKnown RBP16.21■□□□□ 0.19
SCFD1-224ENST00000557713 PFN3P60673 137 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 GABREP78334 506 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 PDE1CQ14123 709 aaPredicted RBP16.21■□□□□ 0.19
SCFD1-224ENST00000557713 DPCR1Q3MIW9 517 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 CCDC14Q49A88 953 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 ZNF805Q5CZA5 627 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 FAM72AQ5TYM5 149 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 FAM72DQ6L9T8 149 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 ZCCHC8Q6NZY4 707 aaKnown RBP16.21■□□□□ 0.19
SCFD1-224ENST00000557713 PCSK4Q6UW60 755 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 FAM72BQ86X60 149 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 IFI44Q8TCB0 444 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 MAPK15Q8TD08 544 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 RXFP2Q8WXD0 754 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 TM6SF2Q9BZW4 377 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 POLR1BQ9H9Y6 1135 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 METTL5Q9NRN9 209 aaKnown RBP16.21■□□□□ 0.19
SCFD1-224ENST00000557713 SAMSN1Q9NSI8 373 aaKnown RBP16.21■□□□□ 0.19
SCFD1-224ENST00000557713 EVA1BQ9NVM1 165 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 TMEM248Q9NWD8 314 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 GGT7Q9UJ14 662 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 SALL4Q9UJQ4 1053 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 NOCTQ9UK39 431 aaKnown RBP16.21■□□□□ 0.19
SCFD1-224ENST00000557713 NEU3Q9UQ49 428 aa16.21■□□□□ 0.19
SCFD1-224ENST00000557713 TDRD6O60522 2096 aaKnown RBP16.21■□□□□ 0.19
SCFD1-224ENST00000557713 TRPM6Q9BX84 2022 aa16.21■□□□□ 0.18
SCFD1-224ENST00000557713 KALRNO60229 2985 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 H3BM21 787 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 AQP9O43315 295 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 GSRP00390 522 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 CHRNB2P17787 502 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 TGM2P21980 687 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 MMP8P22894 467 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 MAPKAPK2P49137 400 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 GEMIN4P57678 1058 aaKnown RBP16.2■□□□□ 0.18
SCFD1-224ENST00000557713 ERVPABLB-1P60509 514 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 CXADRP78310 365 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 EIF2B5Q13144 721 aaKnown RBP16.2■□□□□ 0.18
SCFD1-224ENST00000557713 ISXQ2M1V0 245 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 C15orf59Q2T9L4 293 aaPredicted RBP16.2■□□□□ 0.18
SCFD1-224ENST00000557713 MYLK3Q32MK0 819 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 ARL13BQ3SXY8 428 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 ZNF677Q86XU0 584 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 DENND6BQ8NEG7 585 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 OR2AP1Q8NGE2 309 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 OR6K2Q8NGY2 324 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 SLC20A1Q8WUM9 679 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 CENPIQ92674 756 aaPredicted RBP16.2■□□□□ 0.18
SCFD1-224ENST00000557713 CENPTQ96BT3 561 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 LGMNQ99538 433 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 MAGEH1Q9H213 219 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 CLSTN2Q9H4D0 955 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 NCKIPSDQ9NZQ3 722 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 DNAI1Q9UI46 699 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 ITM2BQ9Y287 266 aa16.2■□□□□ 0.18
SCFD1-224ENST00000557713 PTPRQQ9UMZ3 2332 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 EME2A4GXA9 379 aaPredicted RBP16.19■□□□□ 0.18
SCFD1-224ENST00000557713 C2CD4BA6NLJ0 364 aa16.19■□□□□ 0.18
SCFD1-224ENST00000557713 KRIT1O00522 736 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms