RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ALDH9A1P49189 494 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 CDKL4Q5MAI5 379 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 AMIGO1Q86WK6 493 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 SLC30A8Q8IWU4 369 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 LRRC34Q8IZ02 419 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 NOA1Q8NC60 698 aaKnown RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 IL22Q9GZX6 179 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 NAGPAQ9UK23 515 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 USP18Q9UMW8 372 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 M0QX08 132 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 WFS1O76024 890 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 STAG3L1P0CL83 205 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 IL13P35225 146 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 OTUB2Q96DC9 234 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 GIMAP5Q96F15 307 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 RIT2Q99578 217 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 PIH1D3Q9NQM4 214 aaKnown RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 THG1LQ9NWX6 298 aaKnown RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 MAGEL2Q9UJ55 1249 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 MAPKBP1O60336 1514 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 HSBP1L1C9JCN9 74 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 FGFR2P21802 821 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 DGKAP23743 735 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 RGS6P49758 472 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 CPT1AP50416 773 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 SLC7A2P52569 658 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 KLHL26Q53HC5 615 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 A0A0G2JMP0 313 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 KCNQ3O43525 872 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 UGT2B17O75795 530 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 PSMG1O95456 288 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 SLC10A7Q0GE19 358 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ALX1Q15699 326 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 CARTPTQ16568 116 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF280BQ86YH2 543 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 OR4M2Q8NGB6 313 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 CDADC1Q9BWV3 514 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 CYP7B1O75881 506 aa8.92□□□□□ -0.98
SYNE3-205ENST00000557275 CDH5P33151 784 aaPredicted RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ARCN1P48444 511 aaKnown RBP8.92□□□□□ -0.98
SYNE3-205ENST00000557275 ITSN1Q15811 1721 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ENTPD5O75356 428 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 IGFALSP35858 605 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 STARD3Q14849 445 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 NFE2Q16621 373 aaPredicted RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 MTX3Q5HYI7 312 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ZCCHC12Q6PEW1 402 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 AHCYL2Q96HN2 611 aaKnown RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PHF12Q96QT6 1004 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PLEKHF1Q96S99 279 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF471Q9BX82 626 aaPredicted RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 LRMDAQ9H2I8 198 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 C14orf105Q9NVL8 296 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 DNAAF2Q9NVR5 837 aaKnown RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 SH3D21A4FU49 640 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 CLDN25C9JDP6 229 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 FTH1P02794 183 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 AP2S1P53680 142 aaPredicted RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ELAVL2Q12926 359 aaKnown RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 CBX3Q13185 183 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PON3Q15166 354 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ARHGAP36Q6ZRI8 547 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 RAB2BQ8WUD1 216 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 NXPE2Q96DL1 559 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 RTKNQ9BST9 563 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 MTF2Q9Y483 593 aaPredicted RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PCDHGB7Q9Y5F8 929 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 TAF6P49848 677 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF621Q6ZSS3 439 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 CPA5Q8WXQ8 436 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 CREB3L1Q96BA8 519 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 FNDC11Q9BVV2 318 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ACAT2Q9BWD1 397 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 COMMD4Q9H0A8 199 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 USP17L10C9JJH3 530 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PPP2R2BQ00005 443 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PRKG2Q13237 762 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 FRMD7Q6ZUT3 714 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ATG9AQ7Z3C6 839 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ANKHQ9HCJ1 492 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 TRIOBPQ9H2D6 2365 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PITPNM1O00562 1244 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 FCHO1O14526 889 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 MAZP56270 477 aaKnown RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 TAF5Q15542 800 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 ABCA11PQ4W5N1 156 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 BHLHE22Q8NFJ8 381 aaPredicted RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 METTL6Q8TCB7 284 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PLAGL2Q9UPG8 496 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 HMGCRP04035 888 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 SRCP12931 536 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 PHKG2P15735 406 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 LHX1P48742 406 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 TTMPQ5BVD1 217 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 SLC25A41Q8N5S1 370 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 OR52K2Q8NGK3 314 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 OR14K1Q8NGZ2 314 aa8.91□□□□□ -0.98
SYNE3-205ENST00000557275 CUEDC1Q9NWM3 386 aaPredicted RBP8.91□□□□□ -0.98
SYNE3-205ENST00000557275 AGAP1Q9UPQ3 857 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms