RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 C1orf61Q13536 156 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 SPIDRQ14159 915 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 TGIF1Q15583 401 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 LINC00303Q3SY05 128 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 PRRT3Q5FWE3 981 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 EFHC1Q5JVL4 640 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 OTUD1Q5VV17 481 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 ISM2Q6H9L7 571 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 OLFML1Q6UWY5 402 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 FAM183BPQ6ZVS7 135 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 SETD3Q86TU7 594 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 PASD1Q8IV76 773 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 ZNF683Q8IZ20 524 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 FMR1NBQ8N0W7 255 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 OR7D4Q8NG98 312 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 SPATA20Q8TB22 786 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 NAT6Q93015 286 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 SMARCE1Q969G3 411 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 DHTKD1Q96HY7 919 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 PPP1R13BQ96KQ4 1090 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 CCDC3Q9BQI4 270 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 SPON2Q9BUD6 331 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 C1QTNF2Q9BXJ5 285 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 TKTL2Q9H0I9 626 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 ASNSD1Q9NWL6 643 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 MPP6Q9NZW5 540 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 SPASTQ9UBP0 616 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 APOBEC3BQ9UH17 382 aaKnown RBP9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 GGT7Q9UJ14 662 aa9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 PNMA8BQ9ULN7 279 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-227ENST00000556897 BECN2A8MW95 431 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 LMO7DNF2Z398 122 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 NEMP1O14524 444 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 PLD2O14939 933 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 TSPAN6O43657 245 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 AP1G1O43747 822 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 DAB1O75553 588 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 GJB6O95452 261 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 ERBB2P04626 1255 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 SLC5A2P31639 672 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 L1CAMP32004 1257 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 USP8P40818 1118 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 CXCR3P49682 368 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 SERPINH1P50454 418 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 CCNHP51946 323 aaPredicted RBP9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 THOP1P52888 689 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 SRSF1Q07955 248 aaKnown RBP eCLIP9.19□□□□□ -0.941e-8■■■□□ 14.8
HNRNPC-227ENST00000556897 STIM1Q13586 685 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 CARD16Q5EG05 197 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 KLHL10Q6JEL2 608 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 RETSATQ6NUM9 610 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 TTI2Q6NXR4 508 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 GJB7Q6PEY0 223 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 C11orf57Q6ZUT1 292 aaPredicted RBP9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 USP53Q70EK8 1073 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 PARS2Q7L3T8 475 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 B3GNT8Q7Z7M8 397 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 TRIM59Q8IWR1 403 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 PHACTR4Q8IZ21 702 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 OR6K2Q8NGY2 324 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 WDR48Q8TAF3 677 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 BTN2A2Q8WVV5 523 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 EXTL1Q92935 676 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 GLMNQ92990 594 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 LENG8Q96PV6 779 aaPredicted RBP9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 HEPHQ9BQS7 1158 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 ARHGAP9Q9BRR9 750 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 LRRC61Q9BV99 259 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 FOXP3Q9BZS1 431 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 WDCPQ9H6R7 721 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 TMPRSS4Q9NRS4 437 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 ARHGEF38Q9NXL2 777 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 PADI4Q9UM07 663 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 ITM2BQ9Y287 266 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 FCF1Q9Y324 198 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 ACTL7AQ9Y615 435 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 NBASA2RRP1 2371 aa9.19□□□□□ -0.94
HNRNPC-227ENST00000556897 DRGXA6NNA5 263 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 NTN3O00634 580 aaPredicted RBP9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 TERTO14746 1132 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 YY2O15391 372 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 NOBOXO60393 691 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 ZMPSTE24O75844 475 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 AFPP02771 609 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 ANXA6P08133 673 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 CELA2BP08218 269 aaPredicted RBP9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 FAM87AP0C7U9 286 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 HGFP14210 728 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 TSHRP16473 764 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 ITGB6P18564 788 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 GKP32189 559 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 NOS2P35228 1153 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 ABL2P42684 1182 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 RNASE9P60153 205 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 ARF5P84085 180 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 SLC6A3Q01959 620 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 PTK2BQ14289 1009 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 TCEA2Q15560 299 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 BRMS1LQ5PSV4 323 aa9.18□□□□□ -0.94
HNRNPC-227ENST00000556897 FAXCQ5TGI0 409 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms