RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 EIF2B4Q9UI10 523 aaKnown RBP22.9■■□□□ 1.26
PABPN1-206ENST00000556809 PPP2R2CQ9Y2T4 447 aa22.9■■□□□ 1.26
PABPN1-206ENST00000556809 ACTL7AQ9Y615 435 aa22.9■■□□□ 1.26
PABPN1-206ENST00000556809 CAPN6Q9Y6Q1 641 aa22.9■■□□□ 1.26
PABPN1-206ENST00000556809 ZSCAN5CA6NGD5 496 aaPredicted RBP22.89■■□□□ 1.25
PABPN1-206ENST00000556809 ARHGAP42A6NI28 874 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 CFIP05156 583 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 ENGP17813 658 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 CTNNA1P35221 906 aaKnown RBP22.89■■□□□ 1.25
PABPN1-206ENST00000556809 SERPINB6P35237 376 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 MARCKSL1P49006 195 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 PAPOLAP51003 745 aaKnown RBP22.89■■□□□ 1.25
PABPN1-206ENST00000556809 GEMIN4P57678 1058 aaKnown RBP22.89■■□□□ 1.25
PABPN1-206ENST00000556809 ERMP1Q7Z2K6 904 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 KATNAL2Q8IYT4 538 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 NETO2Q8NC67 525 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 PIP4K2CQ8TBX8 421 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 GANCQ8TET4 914 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 KRT35Q92764 455 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 RNF25Q96BH1 459 aaPredicted RBP22.89■■□□□ 1.25
PABPN1-206ENST00000556809 LZTFL1Q9NQ48 299 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 FSCN3Q9NQT6 498 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 SLCO1B1Q9Y6L6 691 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 CACNA1AO00555 2505 aa22.89■■□□□ 1.25
PABPN1-206ENST00000556809 A0A1B0GTW7 788 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 DCDC2BA2VCK2 349 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 C4orf47A7E2U8 309 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 RNF103O00237 685 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 DFFAO00273 331 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 IGHV4-34P06331 123 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 GNSP15586 552 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 CHRNA3P32297 505 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 FAM46CQ5VWP2 391 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 NCBP2-AS2Q69YL0 99 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 DGLUCYQ7Z3D6 616 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 PEX26Q7Z412 305 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 NT5DC3Q86UY8 548 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 ZCCHC9Q8N567 271 aaKnown RBP22.88■■□□□ 1.25
PABPN1-206ENST00000556809 PQLC3Q8N755 202 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 CHST14Q8NCH0 376 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 TMIEQ8NEW7 156 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 RNF157Q96PX1 679 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 TNKS2Q9H2K2 1166 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 TMEM9BQ9NQ34 198 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 AMFRQ9UKV5 643 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 PCDHA3Q9Y5H8 950 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 PLXNA2O75051 1894 aa22.88■■□□□ 1.25
PABPN1-206ENST00000556809 PLK4O00444 970 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 ARHGAP33O14559 1287 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 BNIP3LO60238 219 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 CTNNA2P26232 953 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 ADPRHP54922 357 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 PAFAH1B3Q15102 231 aaKnown RBP22.87■■□□□ 1.25
PABPN1-206ENST00000556809 KIAA0895LQ68EN5 471 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 NCEH1Q6PIU2 408 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 MFSD7Q6UXD7 560 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.87■■□□□ 1.25
PABPN1-206ENST00000556809 DPY19L3Q6ZPD9 716 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 TP53INP2Q8IXH6 220 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 PCDH20Q8N6Y1 951 aaKnown RBP22.87■■□□□ 1.25
PABPN1-206ENST00000556809 OR2T34Q8NGX1 318 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 VOPP1Q96AW1 172 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 ISG20Q96AZ6 181 aaKnown RBP22.87■■□□□ 1.25
PABPN1-206ENST00000556809 CCDC114Q96M63 670 aa22.87■■□□□ 1.25
PABPN1-206ENST00000556809 FCF1Q9Y324 198 aaKnown RBP22.87■■□□□ 1.25
PABPN1-206ENST00000556809 CCDC66A2RUB6 948 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 C1QTNF3-AMACRE9PGA6 284 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 BCAT2O15382 392 aaPredicted RBP22.86■■□□□ 1.25
PABPN1-206ENST00000556809 SLC7A4O43246 635 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 MFSD11O43934 449 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 ZRANB2O95218 330 aaKnown RBP eCLIP22.86■■□□□ 1.254e-7■■□□□ 12.5
PABPN1-206ENST00000556809 FTCDO95954 541 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 CNTN1Q12860 1018 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 AGBL4Q5VU57 503 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 LEKR1Q6ZMV7 388 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 PLPP6Q8IY26 295 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 RCOR2Q8IZ40 523 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 EXD1Q8NHP7 514 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.86■■□□□ 1.25
PABPN1-206ENST00000556809 RBM41Q96IZ5 413 aaKnown RBP22.86■■□□□ 1.25
PABPN1-206ENST00000556809 MAK16Q9BXY0 300 aaKnown RBP22.86■■□□□ 1.25
PABPN1-206ENST00000556809 MIR1-1HGQ9H1L0 117 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 EBF2Q9HAK2 575 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 PDFQ9HBH1 243 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 FARP1Q9Y4F1 1045 aaPredicted RBP22.86■■□□□ 1.25
PABPN1-206ENST00000556809 WASF2Q9Y6W5 498 aa22.86■■□□□ 1.25
PABPN1-206ENST00000556809 LRRC72A6NJI9 287 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 J3KR12 359 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 PRAMEF11O60813 436 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 FSBPO95073 299 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 CD27P26842 260 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 CDKN2BP42772 138 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 TAZQ16635 292 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 CARD16Q5EG05 197 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 SPOCD1Q6ZMY3 1216 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 OR14C36Q8NHC7 312 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 CASKIN2Q8WXE0 1202 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 SP110Q9HB58 689 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 IL36AQ9UHA7 158 aa22.85■■□□□ 1.25
PABPN1-206ENST00000556809 IPO11Q9UI26 975 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms