RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TFCP2Q12800 502 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 ILF2Q12905 390 aaKnown RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 LMAN2Q12907 356 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 TARDBPQ13148 414 aaKnown RBP eCLIP6.28□□□□□ -1.4
TDP1-215ENST00000556498 DOC2BQ14184 412 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 FLOT2Q14254 428 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 PLS1Q14651 629 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 SNX17Q15036 470 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 CHRNA6Q15825 494 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 C21orf62-AS1Q17RA5 79 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 ZNF829Q3KNS6 432 aaPredicted RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 ANKRD20A4Q4UJ75 823 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 TNFAIP8L3Q5GJ75 292 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 C1orf185Q5T7R7 199 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 RNF43Q68DV7 783 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 SYCE2Q6PIF2 218 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 PDZD4Q76G19 769 aaPredicted RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 TAS2R42Q7RTR8 314 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 TMPRSS9Q7Z410 1059 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 HEATR3Q7Z4Q2 680 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 TPRA1Q86W33 373 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 RIOX2Q8IUF8 465 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 ZDHHC17Q8IUH5 632 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 CRYBG2Q8N1P7 616 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 FAM109AQ8N4B1 249 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 TOP6BLQ8N6T0 577 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 C12orf29Q8N999 325 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 TRPV3Q8NET8 790 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 POC1BQ8TC44 478 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 PIWIL2Q8TC59 973 aaKnown RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 NSUN6Q8TEA1 469 aaKnown RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 CCDC12Q8WUD4 166 aaPredicted RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 POMGNT1Q8WZA1 660 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 LPPQ93052 612 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 RFT1Q96AA3 541 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 RHBDF1Q96CC6 855 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 NMD3Q96D46 503 aaKnown RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 ARHGEF26Q96DR7 871 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 FAM122AQ96E09 287 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 FAR2Q96K12 515 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 CCDC17Q96LX7 622 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 SLC6A18Q96N87 628 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 TWNKQ96RR1 684 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 CYTH2Q99418 400 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 C1QTNF7Q9BXJ2 289 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 FRMD8P1Q9BZ68 369 aaPredicted RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 USP44Q9H0E7 712 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 RHBGQ9H310 441 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 DHX33Q9H6R0 707 aaKnown RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 PHAXQ9H814 394 aaKnown RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 PLSCR4Q9NRQ2 329 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 DDX19AQ9NUU7 478 aaKnown RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 MTMR4Q9NYA4 1195 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.28□□□□□ -1.4
TDP1-215ENST00000556498 COPG2Q9UBF2 871 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 VPS28Q9UK41 221 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 TRHDEQ9UKU6 1024 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 ZNF214Q9UL59 606 aaPredicted RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 ZBTB21Q9ULJ3 1066 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 PADI4Q9UM07 663 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 FAM50BQ9Y247 325 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 TDRKHQ9Y2W6 561 aaKnown RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 GMPPBQ9Y5P6 360 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 LMTK2Q8IWU2 1503 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 ADCY9O60503 1353 aa6.28□□□□□ -1.4
TDP1-215ENST00000556498 NUP153P49790 1475 aaKnown RBP6.28□□□□□ -1.4
TDP1-215ENST00000556498 FLT1P17948 1338 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 NRCAMQ92823 1304 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ANKRD50Q9ULJ7 1429 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 EHBP1L1Q8N3D4 1523 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 LOC100506127A0A0U1RQW1 187 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 HMX3A6NHT5 357 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 ZNF839A8K0R7 811 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 hCG_2039718K7EN88 272 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 M0R3H8 397 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 OGTO15294 1046 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 TP73O15350 636 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 AP1G1O43747 822 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 GPRIN2O60269 458 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 EFCAB14O75071 495 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 PEX11AO75192 247 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 TRIM3O75382 744 aaPredicted RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 CCNKO75909 580 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 LYPLA2O95372 231 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 PGK2P07205 417 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 KRT19P08727 400 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 FAM87AP0C7U9 286 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 SRGAP2CP0DJJ0 459 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 LTKP29376 864 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 CDH5P33151 784 aaPredicted RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 SLC1A4P43007 532 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 RECQLP46063 649 aaPredicted RBP6.27□□□□□ -1.41
TDP1-215ENST00000556498 FNTBP49356 437 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 HNRNPMP52272 730 aaKnown RBP eCLIP6.27□□□□□ -1.41
TDP1-215ENST00000556498 CACNB3P54284 484 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 CDR2Q01850 454 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 CREB5Q02930 508 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 TAP2Q03519 686 aa6.27□□□□□ -1.41
TDP1-215ENST00000556498 CHAF1BQ13112 559 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms