RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 KPNA5O15131 536 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 MDM4O15151 490 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 ST8SIA5O15466 376 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 PIAS1O75925 651 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 BEST1O76090 585 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 MYL4P12829 197 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 GSTT1P30711 240 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 MAPKAPK2P49137 400 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF157P51786 506 aaPredicted RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 EIF3EP60228 445 aaKnown RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 STAT4Q14765 748 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 TRIM71Q2Q1W2 868 aaKnown RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 ANO4Q32M45 955 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 PDCD4Q53EL6 469 aaKnown RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 SLC26A9Q7LBE3 791 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 GALNT5Q7Z7M9 940 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 ZC3H18Q86VM9 953 aaKnown RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 SESTD1Q86VW0 696 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 ANKRD52Q8NB46 1076 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 OR7G1Q8NGA0 311 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 OR6P1Q8NGX9 317 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 SLC2A14Q8TDB8 520 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 LRRN4Q8WUT4 740 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 SEC16BQ96JE7 1060 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 TRIM62Q9BVG3 475 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 RHBGQ9H310 441 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 RAD21L1Q9H4I0 556 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 PDP2Q9P2J9 529 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 FBXL21Q9UKT6 434 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 C17orf102A2RUQ5 167 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 PRPSAP2O60256 369 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 CHEK2O96017 543 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 THEGLP0DJG4 465 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 ADORA2BP29275 332 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 PTPN9P43378 593 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 IFNAR2P48551 515 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 DIO1P49895 249 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 GDI2P50395 445 aaKnown RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 BCAT1P54687 386 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 GPR85P60893 370 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 BST2Q10589 180 aaKnown RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 PDIA2Q13087 525 aaKnown RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 CRHR2Q13324 411 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 DMC1Q14565 340 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 KCNJ11Q14654 390 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 EFTUD2Q15029 972 aaKnown RBP eCLIP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 NFE2Q16621 373 aaPredicted RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 HIF1AQ16665 826 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 DEPDC1Q5TB30 811 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 ARCQ7LC44 396 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 BNIPLQ7Z465 357 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 PIGWQ7Z7B1 504 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 TRABD2AQ86V40 505 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 TDRPQ86YL5 185 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 IGDCC3Q8IVU1 814 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 PPIL6Q8IXY8 311 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 FUKQ8N0W3 1084 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 C3orf58Q8NDZ4 430 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 RTP4Q96DX8 246 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 ZIC5Q96T25 663 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 PIP5K1AQ99755 562 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 MRPL1Q9BYD6 325 aaKnown RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 ARHGAP39Q9C0H5 1083 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 ELAC1Q9H777 363 aaKnown RBP5.17□□□□□ -1.58
TMEM260-210ENST00000556422 PRM3Q9NNZ6 103 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 MLXIPLQ9NP71 852 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 TMEM30AQ9NV96 361 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 GRID1Q9ULK0 1009 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 RNF112Q9ULX5 631 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 SPATA2Q9UM82 520 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 GIT1Q9Y2X7 761 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 USP3Q9Y6I4 520 aa5.17□□□□□ -1.58
TMEM260-210ENST00000556422 C17orf113A0A1B0GUU1 675 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 MANSC4A6NHS7 340 aaPredicted RBP5.16□□□□□ -1.58
TMEM260-210ENST00000556422 GABRDO14764 452 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 PEX1O43933 1283 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 OAS1P00973 400 aaKnown RBP5.16□□□□□ -1.58
TMEM260-210ENST00000556422 CD4P01730 458 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 C1QAP02745 245 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 CKBP12277 381 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 CYBAP13498 195 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 APEHP13798 732 aaKnown RBP5.16□□□□□ -1.58
TMEM260-210ENST00000556422 SSTR1P30872 391 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 SDC4P31431 198 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 ARL1P40616 181 aaPredicted RBP5.16□□□□□ -1.58
TMEM260-210ENST00000556422 RGS2P41220 211 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 EIF2B2P49770 351 aaKnown RBP5.16□□□□□ -1.58
TMEM260-210ENST00000556422 TAF6P49848 677 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 PITX1P78337 314 aaPredicted RBP5.16□□□□□ -1.58
TMEM260-210ENST00000556422 SCRN3Q0VDG4 424 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 SLC10A2Q12908 348 aaPredicted RBP5.16□□□□□ -1.58
TMEM260-210ENST00000556422 SQLEQ14534 574 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 ACAP2Q15057 778 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 DPYSL2Q16555 572 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 SPATS1Q496A3 300 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 VSIG1Q86XK7 387 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 ZDHHC17Q8IUH5 632 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 ANKMY2Q8IV38 441 aa5.16□□□□□ -1.58
TMEM260-210ENST00000556422 SRRM1Q8IYB3 904 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms