RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 U3KQA8 63 aa13.53□□□□□ -0.24
TGFB3-204ENST00000556285 IGLON5A6NGN9 336 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 CASC3O15234 703 aaKnown RBP13.52□□□□□ -0.25
TGFB3-204ENST00000556285 SPINT1O43278 529 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 BRINP1O60477 761 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 MT-CO3P00414 261 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 EEF1GP26641 437 aaKnown RBP13.52□□□□□ -0.25
TGFB3-204ENST00000556285 JAM2P57087 298 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 DAB2P98082 770 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 CDR2Q01850 454 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 SLC20A2Q08357 652 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 CCDC15Q0P6D6 951 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 PTP4A2Q12974 167 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 FZD2Q14332 565 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 RWDD4Q6NW29 188 aaKnown RBP13.52□□□□□ -0.25
TGFB3-204ENST00000556285 DCBLD1Q8N8Z6 715 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 MSANTD4Q8NCY6 345 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 ARHGEF2Q92974 986 aaKnown RBP13.52□□□□□ -0.25
TGFB3-204ENST00000556285 PPP1R16AQ96I34 528 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 KLF6Q99612 283 aaPredicted RBP13.52□□□□□ -0.25
TGFB3-204ENST00000556285 NRSN2Q9GZP1 204 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 GPR27Q9NS67 375 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 DNAJC28Q9NX36 388 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 DACH1Q9UI36 760 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 RP1P56715 2156 aa13.52□□□□□ -0.25
TGFB3-204ENST00000556285 LRP4O75096 1905 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 C2CD4BA6NLJ0 364 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 A6NNZ2 444 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 LRIG2O94898 1065 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 RHOQP17081 205 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 ITIH2P19823 946 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 SOX5P35711 763 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 HDAC4P56524 1084 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 RPS21P63220 83 aaKnown RBP13.51□□□□□ -0.25
TGFB3-204ENST00000556285 LRRC73Q5JTD7 316 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 ATXN7L2Q5T6C5 722 aaPredicted RBP13.51□□□□□ -0.25
TGFB3-204ENST00000556285 ACBD5Q5T8D3 534 aaPredicted RBP13.51□□□□□ -0.25
TGFB3-204ENST00000556285 CDKAL1Q5VV42 579 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 PYROXD2Q8N2H3 581 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 RYBPQ8N488 228 aaPredicted RBP13.51□□□□□ -0.25
TGFB3-204ENST00000556285 ENOX1Q8TC92 643 aaKnown RBP13.51□□□□□ -0.25
TGFB3-204ENST00000556285 FEM1CQ96JP0 617 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 APOLD1Q96LR9 279 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 KLC2Q9H0B6 622 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 OSBPL2Q9H1P3 480 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 NOL6Q9H6R4 1146 aaKnown RBP13.51□□□□□ -0.25
TGFB3-204ENST00000556285 TMEM248Q9NWD8 314 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 HS3ST3A1Q9Y663 406 aa13.51□□□□□ -0.25
TGFB3-204ENST00000556285 SETXQ7Z333 2677 aaKnown RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 HELZ2Q9BYK8 2649 aaKnown RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 C16orf96A6NNT2 1141 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 K7ESM1 405 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 KRIT1O00522 736 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 AP1G1O43747 822 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 OPA1O60313 960 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 PLEKP08567 350 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 CKMT1AP12532 417 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 UNGP13051 313 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 SDC4P31431 198 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 RFC1P35251 1148 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 PTPN9P43378 593 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 E2F1Q01094 437 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 NRG1Q02297 640 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 CDCP2Q5VXM1 449 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 KIAA1161Q6NSJ0 714 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 KYAT3Q6YP21 454 aaKnown RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 ZNF677Q86XU0 584 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 ZNF548Q8NEK5 533 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 SNIP1Q8TAD8 396 aaKnown RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 FAM172AQ8WUF8 416 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 SLC39A7Q92504 469 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 CENPIQ92674 756 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 IFT43Q96FT9 208 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 FCRL3Q96P31 734 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 UBL7Q96S82 380 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 C1QTNF2Q9BXJ5 285 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 TCEAL2Q9H3H9 227 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 FANCLQ9NW38 375 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 TMEM51Q9NW97 253 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 NLGN3Q9NZ94 848 aa13.5□□□□□ -0.25
TGFB3-204ENST00000556285 PNMA8BQ9ULN7 279 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-204ENST00000556285 CFAP46Q8IYW2 2715 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 ANKRD36A6QL64 1941 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 SPTY2D1-AS1A0A0U1RR47 76 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 A0A1W2PNU3 283 aaPredicted RBP13.49□□□□□ -0.25
TGFB3-204ENST00000556285 SCAMP1O15126 338 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 CSF2P04141 144 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 UGT2B4P06133 528 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 MAPKAPK2P49137 400 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 CCDC173Q0VFZ6 552 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 EIF2B5Q13144 721 aaKnown RBP13.49□□□□□ -0.25
TGFB3-204ENST00000556285 PDE1CQ14123 709 aaPredicted RBP13.49□□□□□ -0.25
TGFB3-204ENST00000556285 MYLK3Q32MK0 819 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 ARL13BQ3SXY8 428 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 ZNF805Q5CZA5 627 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 WDR59Q6PJI9 974 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 STRADAQ7RTN6 431 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 RBFAQ8N0V3 343 aa13.49□□□□□ -0.25
TGFB3-204ENST00000556285 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms