RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 THAP12O43422 761 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 BEST1O76090 585 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 RTN3O95197 1032 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 HMBSP08397 361 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 IRF1P10914 325 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 MBL2P11226 248 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 ACO1P21399 889 aaKnown RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 CD72P21854 359 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 TBXAS1P24557 533 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 ADCY8P40145 1251 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 MAGEA11P43364 429 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 RGS7P49802 495 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 CACNA2D1P54289 1103 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 RAD23BP54727 409 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 TPM4P67936 248 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 CD83Q01151 205 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 SLC6A3Q01959 620 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 APBA1Q02410 837 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 ROM1Q03395 351 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 UBXN1Q04323 297 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 TAF10Q12962 218 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 RAPGEF1Q13905 1077 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 STILQ15468 1287 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 MAN2A1Q16706 1144 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 EXOC3L4Q17RC7 722 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 GOLGA7BQ2TAP0 167 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 ATP13A4Q4VNC1 1196 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 SLC44A4Q53GD3 710 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 TCP11X2Q5H9J9 407 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 FKBP15Q5T1M5 1219 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 RNF187Q5TA31 235 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 ESRP1Q6NXG1 681 aaKnown RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 BORAQ6PGQ7 559 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 VSTM1Q6UX27 236 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 GAREM2Q75VX8 874 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 CXXC5Q7LFL8 322 aaKnown RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 STRA8Q7Z7C7 330 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 SUGP1Q8IWZ8 645 aaKnown RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 UBALD2Q8IYN6 164 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 CRYBG2Q8N1P7 616 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 TTC39CQ8N584 583 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 ARL14EPQ8N8R7 260 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 SLC4A11Q8NBS3 891 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 LEMD2Q8NC56 503 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 TMEM174Q8WUU8 243 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 SMARCD2Q92925 531 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 KAT5Q92993 513 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 FUBP3Q96I24 572 aaKnown RBP eCLIP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 ZFYVE19Q96K21 471 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 SLITRK1Q96PX8 696 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 MED15Q96RN5 788 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 TWNKQ96RR1 684 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 TTC1Q99614 292 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 SMOQ99835 787 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 FOXB1Q99853 325 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 LSM14BQ9BX40 385 aaKnown RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 SLC46A2Q9BY10 475 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 DUSP16Q9BY84 665 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 NDST4Q9H3R1 872 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 TASP1Q9H6P5 420 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 LRRC4Q9HBW1 653 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 DMAP1Q9NPF5 467 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-237ENST00000556274 GKN1Q9NS71 199 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 SMPD4Q9NXE4 827 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 GDE1Q9NZC3 331 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 EHD2Q9NZN4 543 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 HSFX1Q9UBD0 423 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 DNAJC12Q9UKB3 198 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 KMT2EQ8IZD2 1858 aa4.88□□□□□ -1.63
ATXN3-237ENST00000556274 BDP1A6H8Y1 2624 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 UNC80Q8N2C7 3258 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 C2orf78A6NCI8 922 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 NEMP1O14524 444 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 P4HA2O15460 535 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 MED7O43513 233 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 DNAJC6O75061 913 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 MOSPD3O75425 235 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 APOL3O95236 402 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 SERPINC1P01008 464 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 PDGFBP01127 241 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 VDRP11473 427 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 HMGA1P17096 107 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 PSMC3P17980 439 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 CD40P25942 277 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 EEF1GP26641 437 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 PON1P27169 355 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 APEX1P27695 318 aaKnown RBP4.87□□□□□ -1.63
ATXN3-237ENST00000556274 KRT9P35527 623 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 MYL5Q02045 173 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 ENPEPQ07075 957 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 SIGLEC14Q08ET2 396 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 HTR4Q13639 388 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 UBXN2BQ14CS0 331 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 KRT31Q15323 416 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 CFAP221Q4G0U5 840 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 FILIP1LQ4L180 1135 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 C10orf120Q5SQS8 335 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 HECTD3Q5T447 861 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 PRAMEF9Q5VWM5 478 aa4.87□□□□□ -1.63
ATXN3-237ENST00000556274 KANK2Q63ZY3 851 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms