RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 KCTD3Q9Y597 815 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 PCDHGB2Q9Y5G2 931 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 RAD54BQ9Y620 910 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 STON1Q9Y6Q2 735 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 CELSR3Q9NYQ7 3312 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 SMG1Q96Q15 3661 aaKnown RBP9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 ACACAQ13085 2346 aa9.37□□□□□ -0.91
GTF2A1-204ENST00000556268 APC2O95996 2303 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 PDXKO00764 312 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 TBX1O43435 398 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 YEATS4O95619 227 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 IRF1P10914 325 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 P4HA1P13674 534 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 PI3P19957 117 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 CHKAP35790 457 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 IL12RB1P42701 662 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 TPMTP51580 245 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 COG7P83436 770 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 GOLGA8FQ08AF8 430 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 GOLGA8DPQ0D2H9 430 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 GRIK2Q13002 908 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 BIRC3Q13489 604 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 CUL4BQ13620 913 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 SOWAHCQ53LP3 525 aaPredicted RBP9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 CCDC186Q7Z3E2 898 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 ZNF227Q86WZ6 799 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 NAXDQ8IW45 347 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 PNPLA1Q8N8W4 532 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 MZB1Q8WU39 189 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 BTN2A2Q8WVV5 523 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 SIGLEC10Q96LC7 697 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 TWNKQ96RR1 684 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 NUP58Q9BVL2 599 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 BLZF1Q9H2G9 400 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 CYP3A43Q9HB55 503 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 ELOVL2Q9NXB9 296 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 HMGXB4Q9UGU5 601 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 LSM7Q9UK45 103 aaKnown RBP9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 PCDHA5Q9Y5H7 936 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 PLXNB3Q9ULL4 1909 aa9.36□□□□□ -0.91
GTF2A1-204ENST00000556268 TRBV23OR9-2A0A075B6M9 112 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 MDM4O15151 490 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 MAPK13O15264 365 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 BCAT2O15382 392 aaPredicted RBP9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 GJB6O95452 261 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 ITGAVP06756 1048 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 THBDP07204 575 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 FAM200BP0CF97 657 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 NCAM1P13591 858 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 COPAP53621 1224 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 ENPEPQ07075 957 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 E2F5Q15329 346 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 GEN1Q17RS7 908 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 HLA-BQ31612 363 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 TMEM215Q68D42 235 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 MBLAC2Q68D91 279 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 IL27RAQ6UWB1 636 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 FAM217AQ8IXS0 508 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 CPXM2Q8N436 756 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 ZNF396Q96N95 335 aaPredicted RBP9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 GPR174Q9BXC1 333 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 DUSP16Q9BY84 665 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 SLC2A11Q9BYW1 496 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 DCLK3Q9C098 648 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 PCED1AQ9H1Q7 454 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 IL21RQ9HBE5 538 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 APOBEC3GQ9HC16 384 aaKnown RBP9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 PLK2Q9NYY3 685 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 GULP1Q9UBP9 304 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 NUDT5Q9UKK9 219 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 CLEC4EQ9ULY5 219 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 PCDHA7Q9UN72 937 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 APOBEC2Q9Y235 224 aaKnown RBP9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 ADAMTS20P59510 1910 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 IGSF10Q6WRI0 2623 aa9.35□□□□□ -0.91
GTF2A1-204ENST00000556268 HLA-DRAP01903 254 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 GLI4P10075 376 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 CYP4F3Q08477 520 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 STARD3Q14849 445 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 NFIL3Q16649 462 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 C10orf120Q5SQS8 335 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 DCAF12L1Q5VU92 463 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 RESP18Q5W5W9 173 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 SPOPLQ6IQ16 392 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 C19orf48Q6RUI8 117 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 SCARA5Q6ZMJ2 495 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 KIAA0907Q7Z7F0 614 aaPredicted RBP9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 TADA2BQ86TJ2 420 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 IGDCC3Q8IVU1 814 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 KIAA0895Q8NCT3 520 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 ERLEC1Q96DZ1 483 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 SIPA1Q96FS4 1042 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 PAGE5Q96GU1 130 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 FAXDC2Q96IV6 333 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 CDK5RAP1Q96SZ6 601 aaKnown RBP9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 CDC6Q99741 560 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 GAREM1Q9H706 876 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 TM7SF3Q9NS93 570 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 FAM49BQ9NUQ9 324 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 RCOR1Q9UKL0 485 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms