RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 TMA16Q96EY4 203 aaKnown RBP18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 SMC6Q96SB8 1091 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 MUC3BQ9H195 1237 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 LSM7Q9UK45 103 aaKnown RBP18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 YBX2Q9Y2T7 364 aaKnown RBP18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 SH3BP1Q9Y3L3 701 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 IQANK1A0A1B0GTG1 560 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 ZCWPW2A0A1B0GU75 182 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 H0Y626 953 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 LEFTY2O00292 366 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 GFRA2O00451 464 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 KDELR3O43731 214 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 MOSPD3O75425 235 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 GSTA1P08263 222 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 NTHL1P78549 312 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 TNK2Q07912 1038 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 ZNF235Q14590 738 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 TEAD2Q15562 447 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 SLC5A9Q2M3M2 681 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 ANKRD20A4Q4UJ75 823 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 SPANXN3Q5MJ09 141 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 GPR158Q5T848 1215 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 TTC39BQ5VTQ0 682 aaPredicted RBP18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 SLC25A41Q8N5S1 370 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 WFDC5Q8TCV5 224 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 PPP1R2P1Q96PQ5 205 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 TGS1Q96RS0 853 aaKnown RBP18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 SEMA3CQ99985 751 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 PLCD4Q9BRC7 762 aa18.92■□□□□ 0.62
SDR39U1-218ENST00000556262 CBX4O00257 560 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 RHOP08100 348 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 PTPN2P17706 415 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 NMBRP28336 390 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 MZF1P28698 734 aaPredicted RBP18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 GPM6BQ13491 265 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 BMPR2Q13873 1038 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 ICE2Q659A1 982 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 HTR3DQ70Z44 454 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 CERS2Q96G23 380 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 SERAC1Q96JX3 654 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 ACE2Q9BYF1 805 aaPredicted RBP18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 PLK2Q9NYY3 685 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 SENP1Q9P0U3 644 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 ZNF180Q9UJW8 692 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 SOX13Q9UN79 622 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 PSAT1Q9Y617 370 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 MYO9BQ13459 2157 aa18.91■□□□□ 0.62
SDR39U1-218ENST00000556262 FAM237BA0A1B0GVD1 139 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 FAM47DPA6NHR8 397 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 CCT8L1PA6NM43 557 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 TRIM49D1C9J1S8 452 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 USP1O94782 785 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 VIMP08670 466 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 EPHA5P54756 1037 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 FAM217AQ8IXS0 508 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 HJURPQ8NCD3 748 aaPredicted RBP18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 GDAP1Q8TB36 358 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 POLR1EQ9GZS1 481 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 UBA2Q9UBT2 640 aaPredicted RBP18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 MYOFQ9NZM1 2061 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 PRRC2BQ5JSZ5 2229 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 XIRP2A4UGR9 3374 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 MAGEB16A2A368 324 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 HMX2A2RU54 273 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 AP3B1O00203 1094 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 SNAP91O60641 907 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 MT-ND3P03897 115 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 F7P08709 466 aaPredicted RBP18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 RPA3P35244 121 aaPredicted RBP18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 SLC18A1P54219 525 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 TPGS1Q6ZTW0 290 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 ADGRD2Q7Z7M1 963 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 RASSF3Q86WH2 238 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 TDRD5Q8NAT2 981 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 RIN3Q8TB24 985 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 DDI1Q8WTU0 396 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 CKAP2Q8WWK9 683 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 SGSM3Q96HU1 749 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 ZNF599Q96NL3 588 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 HCFC2Q9Y5Z7 792 aa18.9■□□□□ 0.62
SDR39U1-218ENST00000556262 PRPF4O43172 522 aaKnown RBP eCLIP18.89■□□□□ 0.614e-10■■■■□ 19.7
SDR39U1-218ENST00000556262 TYROBPO43914 113 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 LUC7L3O95232 432 aaKnown RBP18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 RGRP47804 291 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 MGAT5Q09328 741 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 MROH9Q5TGP6 573 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 LINGO4Q6UY18 593 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 MARK2Q7KZI7 788 aaKnown RBP18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 GRASPQ7Z6J2 395 aaPredicted RBP18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 RNF135Q8IUD6 432 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 CMTM8Q8IZV2 173 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 SH3RF2Q8TEC5 729 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 CDKL2Q92772 493 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 TADA1Q96BN2 335 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 EXOC2Q96KP1 924 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 KIFC1Q9BW19 673 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 VPS45Q9NRW7 570 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 NKIRAS1Q9NYS0 192 aa18.89■□□□□ 0.61
SDR39U1-218ENST00000556262 ZFATQ9P243 1243 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms