RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 B4GALT4O60513 344 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 DLGAP3O95886 979 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 NCF1P14598 390 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 OVGP1Q12889 678 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 OASLQ15646 514 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 FAM110CQ1W6H9 321 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 KIAA0408Q6ZU52 694 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 KIF2BQ8N4N8 673 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 SCAIQ8N9R8 606 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 PPTC7Q8NI37 304 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 ANKRD49Q8WVL7 239 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 PIK3R5Q8WYR1 880 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 ZNF75CPQ92670 426 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 CATSPER2Q96P56 530 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 ACO2Q99798 780 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 TMEM79Q9BSE2 394 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 C1orf50Q9BV19 199 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 SEMA4AQ9H3S1 761 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 DNAJC18Q9H819 358 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 COL5A2P05997 1499 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 KIF1AQ12756 1690 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 WDR27A2RRH5 827 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 TBC1D3BA6NDS4 549 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 CACNB4O00305 520 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 PHGDHO43175 533 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 ACSL4O60488 711 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 IPO13O94829 963 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 IDO1P14902 403 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 HDCP19113 662 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 RAP1GAPP47736 663 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 SPIRE1Q08AE8 756 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 LAPTM5Q13571 262 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 SMAD1Q15797 465 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 TYW3Q6IPR3 259 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 CRELD2Q6UXH1 353 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 RIPOR1Q6ZS17 1223 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 PROSER1Q86XN7 944 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 SLC44A2Q8IWA5 706 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 TMEM161BQ8NDZ6 487 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 KBTBD8Q8NFY9 601 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 MED8Q96G25 268 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 RNF208Q9H0X6 261 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 LIMD1Q9UGP4 676 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 SIK3Q9Y2K2 1263 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 ADGRB1O14514 1584 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 VGLL3A8MV65 326 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 PBLDP30039 288 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 ASMTP46597 345 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 COX10Q12887 443 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 TCEAL5Q5H9L2 206 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 RGMBQ6NW40 437 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 NET1Q7Z628 596 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 C8orf59Q8N0T1 100 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 ZCCHC7Q8N3Z6 543 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 ALLCQ8N6M5 410 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 AVL9Q8NBF6 648 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 DNAJB8Q8NHS0 232 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 MDM1Q8TC05 714 aa10.83□□□□□ -0.68
ACTN1-216ENST00000556083 CLP1Q92989 425 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 RERGQ96A58 199 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 RSL24D1Q9UHA3 163 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 DMGDHQ9UI17 866 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 MRPS23Q9Y3D9 190 aaKnown RBP10.83□□□□□ -0.68
ACTN1-216ENST00000556083 HDAC3O15379 428 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 PQBP1O60828 265 aaKnown RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 CPA2P48052 419 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 ALDH9A1P49189 494 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 OLR1P78380 273 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 PSMD5Q16401 504 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 SEZ6Q53EL9 994 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 FAM20CQ8IXL6 584 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 STK32AQ8WU08 396 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 AP3S1Q92572 193 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 EDEM1Q92611 657 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 NELL1Q92832 810 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 MTMR8Q96EF0 704 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 ASB8Q9H765 288 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 EXD2Q9NVH0 621 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 MRPS17Q9Y2R5 130 aaKnown RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 FAM25AB3EWG3 89 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 FAM25CB3EWG5 89 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 FAM25GB3EWG6 89 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 NDUFB5O43674 189 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 PEX1O43933 1283 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 SEMA3DO95025 777 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 IL6P05231 212 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 SNRPB2P08579 225 aaKnown RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 TSPAN19P0C672 248 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 ZBTB48P10074 688 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 CCNB1P14635 433 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 GLRA2P23416 452 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 KLRK1P26718 216 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 RPL21P46778 160 aaKnown RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 MAMLD1Q13495 774 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 NDUFAF6Q330K2 333 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 MPPE1Q53F39 396 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 EIF3MQ7L2H7 374 aaKnown RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 TRAPPC5Q8IUR0 188 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 CKAP2Q8WWK9 683 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms