RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 GRIN3AQ8TCU5 1115 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 SLC20A1Q8WUM9 679 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 KLK6Q92876 244 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 CCDC114Q96M63 670 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 CFAP57Q96MR6 1250 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 NAP1L5Q96NT1 182 aaPredicted RBP6.85□□□□□ -1.31
PSEN1-216ENST00000556066 MYOCQ99972 504 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 C2orf49Q9BVC5 232 aaPredicted RBP6.85□□□□□ -1.31
PSEN1-216ENST00000556066 STK33Q9BYT3 514 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 TNKS2Q9H2K2 1166 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 CCDC86Q9H6F5 360 aaKnown RBP6.85□□□□□ -1.31
PSEN1-216ENST00000556066 ZFAND3Q9H8U3 227 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 NLRC4Q9NPP4 1024 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 DYRK4Q9NR20 520 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 METTL5Q9NRN9 209 aaKnown RBP6.85□□□□□ -1.31
PSEN1-216ENST00000556066 FAM207AQ9NSI2 230 aaPredicted RBP6.85□□□□□ -1.31
PSEN1-216ENST00000556066 ARHGEF38Q9NXL2 777 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 VPS51Q9UID3 782 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 PPM1HQ9ULR3 514 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 CA5BQ9Y2D0 317 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 TBC1D30Q9Y2I9 924 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 OR51B4Q9Y5P0 310 aa6.85□□□□□ -1.31
PSEN1-216ENST00000556066 COL5A1P20908 1838 aaPredicted RBP6.85□□□□□ -1.31
PSEN1-216ENST00000556066 CHD5Q8TDI0 1954 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 A0A1W2PR77 199 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 DRGXA6NNA5 263 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 ENC1O14682 589 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 ALOX15BO15296 676 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 SLC7A4O43246 635 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 LATO43561 262 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 PLRG1O43660 514 aaKnown RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 RNGTTO60942 597 aaKnown RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 SDC3O75056 442 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 PCDH8O95206 1070 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 LDOC1O95751 146 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 LSM8O95777 96 aaKnown RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 CTSLP07711 333 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 PRLRP16471 622 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 GLDCP23378 1020 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 CHRNA3P32297 505 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 KLK7P49862 253 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 NXPH1P58417 271 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 POLR2FP61218 127 aaKnown RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 NOMO3P69849 1222 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 CCDC15Q0P6D6 951 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 BNIP3Q12983 259 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 CBLBQ13191 982 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 DNAJC3Q13217 504 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 KRT31Q15323 416 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 SHBQ15464 509 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 C5orf22Q49AR2 442 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 SETMARQ53H47 684 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 FKBP15Q5T1M5 1219 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 C6orf118Q5T5N4 469 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 CCDC183Q5T5S1 534 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 TRNP1Q6NT89 227 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 RWDD4Q6NW29 188 aaKnown RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 C19orf48Q6RUI8 117 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 DNAJC14Q6Y2X3 702 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 TMPRSS7Q7RTY8 843 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 SETD3Q86TU7 594 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 PROSER1Q86XN7 944 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 DRC7Q8IY82 874 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 ZNF683Q8IZ20 524 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 GALNT15Q8N3T1 639 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 MFSD2AQ8NA29 543 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 DCAF4L2Q8NA75 395 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 CHST14Q8NCH0 376 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 OR2A12Q8NGT7 310 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 TPCN2Q8NHX9 752 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 SLC30A5Q8TAD4 765 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 NT5C3BQ969T7 300 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 PGAP3Q96FM1 320 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 CNDP2Q96KP4 475 aaKnown RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 C1orf74Q96LT6 269 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 PSMB7Q99436 277 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 C11orf70Q9BRQ4 267 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 NAA15Q9BXJ9 866 aaKnown RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 ZYG11BQ9C0D3 744 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 TSPY26PQ9H489 355 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 TPX2Q9ULW0 747 aaKnown RBP6.84□□□□□ -1.31
PSEN1-216ENST00000556066 HS3ST2Q9Y278 367 aa6.84□□□□□ -1.31
PSEN1-216ENST00000556066 A0A1W2PQU0 124 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 ILVBLA1L0T0 632 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 TRABD2BA6NFA1 517 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 PRAMEF26H0Y7S4 382 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 YKT6O15498 198 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 MAGEC1O60732 1142 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 GJB6O95452 261 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 PRNPP04156 253 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 JUPP14923 745 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 EPHA8P29322 1005 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-216ENST00000556066 SDC4P31431 198 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 SOX5P35711 763 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 NUDT1P36639 197 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 SCNN1AP37088 669 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 CLDN6P56747 220 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 TAS2R38P59533 333 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 CDR2Q01850 454 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 GNA12Q03113 381 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms