RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 OR4C6Q8NH72 309 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 VOPP1Q96AW1 172 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 NXPE2Q96DL1 559 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 VCPIP1Q96JH7 1222 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 C1QTNF2Q9BXJ5 285 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 SLC17A9Q9BYT1 436 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 NRSN2Q9GZP1 204 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 RAB6CQ9H0N0 254 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 USP29Q9HBJ7 922 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 NDFIP2Q9NV92 336 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 DONSONQ9NYP3 566 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 FCF1Q9Y324 198 aaKnown RBP12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 ZFYVE26Q68DK2 2539 aa12.92□□□□□ -0.34
HNRNPC-221ENST00000555883 A0A087WV48 116 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 ANKRD62A6NC57 917 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 EIF3CLB5ME19 914 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 KDELR3O43731 214 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 PIAS2O75928 621 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 POP4O95707 220 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 JUPP14923 745 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 DESP17661 470 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 RABIFP47224 123 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 HNRNPKP61978 463 aaKnown RBP eCLIP12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 E2F1Q01094 437 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 RTP5Q14D33 572 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 PARP15Q460N3 678 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 HS1BP3Q53T59 392 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 EFHC2Q5JST6 749 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 DNAJC24Q6P3W2 148 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 PARS2Q7L3T8 475 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 SLC22A18ASQ8N1D0 253 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 SLC25A45Q8N413 288 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 EIF3CQ99613 913 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 AGPAT1Q99943 283 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 CNPY3Q9BT09 278 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 HSD3B7Q9H2F3 369 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 NLGN3Q9NZ94 848 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 CA5BQ9Y2D0 317 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 MFHAS1Q9Y4C4 1052 aa12.91□□□□□ -0.34
HNRNPC-221ENST00000555883 CHD5Q8TDI0 1954 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 SPTY2D1-AS1A0A0U1RR47 76 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 FAM170AA1A519 330 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 FAM149AA5PLN7 773 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 NEMP2A6NFY4 417 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 C16orf96A6NNT2 1141 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 TOR1BO14657 336 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 FGF10O15520 208 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 SIGLEC6O43699 453 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 GP1BAP07359 652 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 ALPPL2P10696 532 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 CKMT1AP12532 417 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 FERP16591 822 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 CDK11BP21127 795 aaKnown RBP12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 EPHB2P29323 1055 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 DNA2P51530 1060 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 SUOXP51687 545 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 CYP4F3Q08477 520 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 FGL2Q14314 439 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 MYLK3Q32MK0 819 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 HES3Q5TGS1 186 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 Q6ZSR6 202 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 UMODL1-AS1Q8N2C9 162 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 FAM181AQ8N9Y4 354 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 BMFQ96LC9 184 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 PCMTD1Q96MG8 357 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 GDAP1L1Q96MZ0 367 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 KLF6Q99612 283 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 EPAS1Q99814 870 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 BPIFA3Q9BQP9 254 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 SYT11Q9BT88 431 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 DUSP23Q9BVJ7 150 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 TM6SF2Q9BZW4 377 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 TTYH3Q9C0H2 523 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 ZDHHC6Q9H6R6 413 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 CATSPERBQ9H7T0 1116 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 FZD3Q9NPG1 666 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 DKK3Q9UBP4 350 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 RAXQ9Y2V3 346 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 CSNK1G3Q9Y6M4 447 aa12.9□□□□□ -0.34
HNRNPC-221ENST00000555883 TRIM38O00635 465 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 FPGTO14772 594 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 AREL1O15033 823 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 SCAMP1O15126 338 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 CCP110O43303 1012 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 SDC3O75056 442 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 GJB6O95452 261 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 PAK4O96013 591 aaPredicted RBP12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 CSF2P04141 144 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 GIMD1P0DJR0 217 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 NME1P15531 152 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 RAD51Q06609 339 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 SGCGQ13326 291 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 SERINC3Q13530 473 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 GRM3Q14832 879 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 CCDC157Q569K6 752 aa12.89□□□□□ -0.35
HNRNPC-221ENST00000555883 ACAD10Q6JQN1 1059 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms