RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CPA2P48052 419 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 PSEN1P49768 467 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 ITKQ08881 620 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 MARC1Q5VT66 337 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 RFWD3Q6PCD5 774 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 RAPH1Q70E73 1250 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 PGBD5Q8N414 524 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 SH3TC2Q8TF17 1288 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 FATE1Q969F0 183 aa24.58■■□□□ 1.53
TMEM260-207ENST00000555497 ZNF195O14628 629 aa24.58■■□□□ 1.52
TMEM260-207ENST00000555497 GNRH1P01148 92 aa24.58■■□□□ 1.52
TMEM260-207ENST00000555497 ENO1P06733 434 aaKnown RBP24.58■■□□□ 1.52
TMEM260-207ENST00000555497 SLC35E2BP0CK96 405 aa24.58■■□□□ 1.52
TMEM260-207ENST00000555497 SLC1A2P43004 574 aa24.58■■□□□ 1.52
TMEM260-207ENST00000555497 KCNQ1P51787 676 aa24.58■■□□□ 1.52
TMEM260-207ENST00000555497 MSLNQ13421 630 aaPredicted RBP24.58■■□□□ 1.52
TMEM260-207ENST00000555497 WLSQ5T9L3 541 aa24.58■■□□□ 1.52
TMEM260-207ENST00000555497 FBXO27Q8NI29 283 aa24.58■■□□□ 1.52
TMEM260-207ENST00000555497 PTCD2Q8WV60 388 aaKnown RBP24.58■■□□□ 1.52
TMEM260-207ENST00000555497 MOCOSQ96EN8 888 aa24.58■■□□□ 1.52
TMEM260-207ENST00000555497 RPRD1AQ96P16 312 aaPredicted RBP24.58■■□□□ 1.52
TMEM260-207ENST00000555497 SP110Q9HB58 689 aa24.58■■□□□ 1.52
TMEM260-207ENST00000555497 ARNT2Q9HBZ2 717 aa24.58■■□□□ 1.52
TMEM260-207ENST00000555497 WFS1O76024 890 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 CCND1P24385 295 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 ACVRL1P37023 503 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 HADHAP40939 763 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 UBAP2LQ14157 1087 aaKnown RBP24.57■■□□□ 1.52
TMEM260-207ENST00000555497 ZNF460Q14592 562 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 PREPLQ4J6C6 727 aaPredicted RBP24.57■■□□□ 1.52
TMEM260-207ENST00000555497 ZNF354CQ86Y25 554 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 SPNS2Q8IVW8 549 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 CEP97Q8IW35 865 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 TEX26Q8N6G2 289 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 TTPALQ9BTX7 342 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 DENND2DQ9H6A0 471 aaPredicted RBP24.57■■□□□ 1.52
TMEM260-207ENST00000555497 CDY1Q9Y6F8 540 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 SLC38A8A6NNN8 435 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 GYG2O15488 501 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 TLR5O60602 858 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 SIN3BO75182 1162 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 GJB3O75712 270 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 MYCP01106 439 aaPredicted RBP24.57■■□□□ 1.52
TMEM260-207ENST00000555497 KCTD4Q8WVF5 259 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 ACSS2Q9NR19 701 aa24.57■■□□□ 1.52
TMEM260-207ENST00000555497 NKX1-2Q9UD57 310 aaPredicted RBP24.57■■□□□ 1.52
TMEM260-207ENST00000555497 TK2O00142 265 aa24.56■■□□□ 1.52
TMEM260-207ENST00000555497 AURKAO14965 403 aa24.56■■□□□ 1.52
TMEM260-207ENST00000555497 SERPINA6P08185 405 aa24.56■■□□□ 1.52
TMEM260-207ENST00000555497 RPL17P18621 184 aaKnown RBP24.56■■□□□ 1.52
TMEM260-207ENST00000555497 ETFBP38117 255 aa24.56■■□□□ 1.52
TMEM260-207ENST00000555497 CENPLQ8N0S6 344 aaPredicted RBP24.56■■□□□ 1.52
TMEM260-207ENST00000555497 PPP4R1Q8TF05 950 aa24.56■■□□□ 1.52
TMEM260-207ENST00000555497 TASP1Q9H6P5 420 aa24.56■■□□□ 1.52
TMEM260-207ENST00000555497 TLK1Q9UKI8 766 aa24.56■■□□□ 1.52
TMEM260-207ENST00000555497 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.56■■□□□ 1.52
TMEM260-207ENST00000555497 PCDHB12Q9Y5F1 795 aa24.56■■□□□ 1.52
TMEM260-207ENST00000555497 PRR5-ARHGAP8B1AHC4 643 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 PEX11AO75192 247 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 IDH3AP50213 366 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 ARHGAP8P85298 464 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 POLD3Q15054 466 aaPredicted RBP24.55■■□□□ 1.52
TMEM260-207ENST00000555497 ACCSLQ4AC99 568 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 RABGAP1LQ5R372 815 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 VWA5B1Q5TIE3 1220 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 KIAA0930Q6ICG6 404 aaPredicted RBP24.55■■□□□ 1.52
TMEM260-207ENST00000555497 ANKS3Q6ZW76 656 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 PNPLA1Q8N8W4 532 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 C2CD4AQ8NCU7 369 aaPredicted RBP24.55■■□□□ 1.52
TMEM260-207ENST00000555497 ARRDC2Q8TBH0 407 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 ZNF296Q8WUU4 475 aaPredicted RBP24.55■■□□□ 1.52
TMEM260-207ENST00000555497 SIKE1Q9BRV8 207 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 UNC93B1Q9H1C4 597 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 H7C4K7 107 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 PITPNM1O00562 1244 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 GLRBP48167 497 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 RING1Q06587 406 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 ZNF470Q6ECI4 717 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 TTC8Q8TAM2 541 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 TMEM175Q9BSA9 504 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 ACE2Q9BYF1 805 aaPredicted RBP24.55■■□□□ 1.52
TMEM260-207ENST00000555497 ANKRD6Q9Y2G4 727 aa24.55■■□□□ 1.52
TMEM260-207ENST00000555497 FAM95CA0A1B0GW59 222 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 PQBP1O60828 265 aaKnown RBP24.54■■□□□ 1.52
TMEM260-207ENST00000555497 RAMP2O60895 175 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 ALOX15P16050 662 aaPredicted RBP24.54■■□□□ 1.52
TMEM260-207ENST00000555497 ELAVL2Q12926 359 aaKnown RBP24.54■■□□□ 1.52
TMEM260-207ENST00000555497 USP4Q13107 963 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 SERINC3Q13530 473 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 THOC5Q13769 683 aaKnown RBP24.54■■□□□ 1.52
TMEM260-207ENST00000555497 CFAP52Q8N1V2 620 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 FBXO22Q8NEZ5 403 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 TADA1Q96BN2 335 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 GATA5Q9BWX5 397 aaPredicted RBP24.54■■□□□ 1.52
TMEM260-207ENST00000555497 OXSMQ9NWU1 459 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 RUVBL2Q9Y230 463 aaKnown RBP24.54■■□□□ 1.52
TMEM260-207ENST00000555497 TRIM13O60858 407 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 TACR2P21452 398 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 OR1E1P30953 314 aa24.54■■□□□ 1.52
TMEM260-207ENST00000555497 SERPINH1P50454 418 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms