RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 KLK6Q92876 244 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 EXOC2Q96KP1 924 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 CCDC114Q96M63 670 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 CCDC42Q96M95 316 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 KLHL11Q9NVR0 708 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 UVRAGQ9P2Y5 699 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 CA5BQ9Y2D0 317 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 SNX11Q9Y5W9 270 aa13.9□□□□□ -0.18
SNX6-203ENST00000555416 H3BRJ5 948 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 DFFAO00273 331 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 KRIT1O00522 736 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 SLC7A4O43246 635 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 SPINT1O43278 529 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 GSRP00390 522 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 CD59P13987 128 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 GJC1P36383 396 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 ABL2P42684 1182 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 SSR1P43307 286 aaKnown RBP13.89□□□□□ -0.19
SNX6-203ENST00000555416 GEMIN4P57678 1058 aaKnown RBP13.89□□□□□ -0.19
SNX6-203ENST00000555416 TSR1Q2NL82 804 aaKnown RBP13.89□□□□□ -0.19
SNX6-203ENST00000555416 ERN2Q76MJ5 926 aaKnown RBP13.89□□□□□ -0.19
SNX6-203ENST00000555416 ERMP1Q7Z2K6 904 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 RYBPQ8N488 228 aaPredicted RBP13.89□□□□□ -0.19
SNX6-203ENST00000555416 SLC35G2Q8TBE7 412 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 NSMCE3Q96MG7 304 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 NCAPGQ9BPX3 1015 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 HDAC8Q9BY41 377 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 DNAAF2Q9NVR5 837 aaKnown RBP13.89□□□□□ -0.19
SNX6-203ENST00000555416 UBA2Q9UBT2 640 aaPredicted RBP13.89□□□□□ -0.19
SNX6-203ENST00000555416 GGT7Q9UJ14 662 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 TFR2Q9UP52 801 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 ZFR2Q9UPR6 939 aaKnown RBP13.89□□□□□ -0.19
SNX6-203ENST00000555416 ANKRD6Q9Y2G4 727 aa13.89□□□□□ -0.19
SNX6-203ENST00000555416 FNDC3AQ9Y2H6 1198 aaKnown RBP13.89□□□□□ -0.19
SNX6-203ENST00000555416 A0A1W2PR77 199 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 ZSCAN5CA6NGD5 496 aaPredicted RBP13.88□□□□□ -0.19
SNX6-203ENST00000555416 ARHGAP42A6NI28 874 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 MUSKO15146 869 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 RNGTTO60942 597 aaKnown RBP13.88□□□□□ -0.19
SNX6-203ENST00000555416 UGT2B4P06133 528 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 SYPP08247 313 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 ADRB3P13945 408 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 PRLRP16471 622 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 ITIH2P19823 946 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 ITGB7P26010 798 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 AFF3P51826 1226 aaKnown RBP13.88□□□□□ -0.19
SNX6-203ENST00000555416 ATXN3P54252 364 aaPredicted RBP13.88□□□□□ -0.19
SNX6-203ENST00000555416 CDH6P55285 790 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 RHOAP61586 193 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 SNRPD1P62314 119 aaKnown RBP13.88□□□□□ -0.19
SNX6-203ENST00000555416 FGL2Q14314 439 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 MESDQ14696 234 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 ZNF284Q2VY69 593 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 HLA-BQ31612 363 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 INO80DQ53TQ3 878 aaPredicted RBP13.88□□□□□ -0.19
SNX6-203ENST00000555416 LRRC73Q5JTD7 316 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 SEL1L3Q68CR1 1132 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 PIP4P1Q86T03 277 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 TRIM69Q86WT6 500 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 FAM71BQ8TC56 605 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 MRFAP1L1Q96HT8 127 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 KLHL32Q96NJ5 620 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 CAMK1GQ96NX5 476 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 KDM4CQ9H3R0 1056 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 ITM2BQ9Y287 266 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 TMEM131Q92545 1883 aa13.88□□□□□ -0.19
SNX6-203ENST00000555416 A0A1W2PQU0 124 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 C16orf96A6NNT2 1141 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 BUB1BO60566 1050 aaPredicted RBP13.87□□□□□ -0.19
SNX6-203ENST00000555416 KCNK5O95279 499 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 PIGNO95427 931 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 POP4O95707 220 aaKnown RBP13.87□□□□□ -0.19
SNX6-203ENST00000555416 PEX11BO96011 259 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 ARL4AP40617 200 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 GRIA4P48058 902 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 NEK3P51956 506 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 ZNF135P52742 658 aaPredicted RBP13.87□□□□□ -0.19
SNX6-203ENST00000555416 RACK1P63244 317 aaKnown RBP13.87□□□□□ -0.19
SNX6-203ENST00000555416 FAM193AP78312 1265 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 DPYSL3Q14195 570 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 ZNF805Q5CZA5 627 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 PRAMEF14Q5SWL7 426 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 PSAPL1Q6NUJ1 521 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 TSEN2Q8NCE0 465 aaKnown RBP13.87□□□□□ -0.19
SNX6-203ENST00000555416 DEFB124Q8NES8 71 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 CASKIN2Q8WXE0 1202 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 SERAC1Q96JX3 654 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 GDAP1L1Q96MZ0 367 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 MYOCQ99972 504 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 GAREM1Q9H706 876 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 CAAP1Q9H8G2 361 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 PREBQ9HCU5 417 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 DYRK4Q9NR20 520 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 IPO11Q9UI26 975 aaKnown RBP13.87□□□□□ -0.19
SNX6-203ENST00000555416 HYOU1Q9Y4L1 999 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 FADS3Q9Y5Q0 445 aa13.87□□□□□ -0.19
SNX6-203ENST00000555416 TTC24A2A3L6 582 aaPredicted RBP13.86□□□□□ -0.19
SNX6-203ENST00000555416 H0Y8X5 98 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 VILLO15195 856 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 SLC31A1O15431 190 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms