RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TBCEQ15813 527 aaPredicted RBP5.63□□□□□ -1.51
VRK1-203ENST00000555067 RAB11FIP2Q7L804 512 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 SYT13Q7L8C5 426 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 KRT27Q7Z3Y8 459 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 KDELC2Q7Z4H8 507 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 GALNTL5Q7Z4T8 443 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 DIS3L2Q8IYB7 885 aaKnown RBP5.63□□□□□ -1.51
VRK1-203ENST00000555067 NDUFAF2Q8N183 169 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 ARL10Q8N8L6 244 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 AFAP1L1Q8TED9 768 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 EME1Q96AY2 570 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 NTPCRQ9BSD7 190 aaKnown RBP5.63□□□□□ -1.51
VRK1-203ENST00000555067 DESI2Q9BSY9 194 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 ELOVL1Q9BW60 279 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 BRD8Q9H0E9 1235 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 KCND3Q9UK17 655 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 CA14Q9ULX7 337 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 SLC8A2Q9UPR5 921 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 UBE2J1Q9Y385 318 aaPredicted RBP5.63□□□□□ -1.51
VRK1-203ENST00000555067 SNX8Q9Y5X2 465 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 PSAT1Q9Y617 370 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 EVPLQ92817 2033 aa5.63□□□□□ -1.51
VRK1-203ENST00000555067 VWA3AA6NCI4 1184 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 FAM90A18PA6NE21 464 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 FAM90A16PA6NEW6 464 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 FAM90A9PA6NNJ1 464 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 FAM90A5PA8MXJ8 464 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 PPP6R2O75170 966 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 PGM3O95394 542 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 FAM90A15PP0C7V4 464 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 FAM90A14PP0C7W9 464 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 SRGAP2BP0DMP2 458 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 AKT1P31749 480 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 ACSL1P33121 698 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 MAMLD1Q13495 774 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 GRM4Q14833 912 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 GPR68Q15743 365 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 P3H1Q32P28 736 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 ODF3L2Q3SX64 289 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 TTC22Q5TAA0 569 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 RINT1Q6NUQ1 792 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 PXKQ7Z7A4 578 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 RASGRP3Q8IV61 690 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 OR52N4Q8NGI2 321 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 STAMQ92783 540 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 APOPT1Q96IL0 206 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 GPR78Q96P69 363 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 SF3B5Q9BWJ5 86 aaKnown RBP5.62□□□□□ -1.51
VRK1-203ENST00000555067 KRTAP4-4Q9BYR3 166 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 PDCL3Q9H2J4 239 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 FBXO28Q9NVF7 368 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 ARGLU1Q9NWB6 273 aaPredicted RBP5.62□□□□□ -1.51
VRK1-203ENST00000555067 UTS2RQ9UKP6 389 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 CAMK2AQ9UQM7 478 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 PCDHB7Q9Y5E2 793 aa5.62□□□□□ -1.51
VRK1-203ENST00000555067 TRIP12Q14669 1992 aaPredicted RBP5.62□□□□□ -1.51
VRK1-203ENST00000555067 TRIM64A6NGJ6 449 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 TRIM64BA6NI03 449 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 A6NNC1 897 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 RHODO00212 210 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 KLK10O43240 276 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 ERAL1O75616 437 aaKnown RBP5.61□□□□□ -1.51
VRK1-203ENST00000555067 WNT1P04628 370 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 RFPL3SP0C7P2 107 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 HSPA1AP0DMV8 641 aaKnown RBP5.61□□□□□ -1.51
VRK1-203ENST00000555067 HSPA1BP0DMV9 641 aaKnown RBP5.61□□□□□ -1.51
VRK1-203ENST00000555067 CHRNB1P11230 501 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 CPA1P15085 419 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 PGM1P36871 562 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 RBM5P52756 815 aaKnown RBP eCLIP5.61□□□□□ -1.51
VRK1-203ENST00000555067 NLRP5P59047 1200 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 MC1RQ01726 317 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 GAD2Q05329 585 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 SOS1Q07889 1333 aaPredicted RBP5.61□□□□□ -1.51
VRK1-203ENST00000555067 RPS6KA2Q15349 733 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 ASIC2Q16515 512 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 ATF7IPQ6VMQ6 1270 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 RPAP2Q8IXW5 612 aaPredicted RBP5.61□□□□□ -1.51
VRK1-203ENST00000555067 TTC39CQ8N584 583 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 IQCF1Q8N6M8 205 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 USP38Q8NB14 1042 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 USP6NLQ92738 828 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 MIB2Q96AX9 1013 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 CNDP2Q96KP4 475 aaKnown RBP5.61□□□□□ -1.51
VRK1-203ENST00000555067 ABHD14AQ9BUJ0 271 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 MRPL9Q9BYD2 267 aaKnown RBP5.61□□□□□ -1.51
VRK1-203ENST00000555067 SYNCQ9H7C4 482 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 AAMDCQ9H7C9 122 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 IL21RQ9HBE5 538 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 TBC1D14Q9P2M4 693 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 ZNF215Q9UL58 517 aaPredicted RBP5.61□□□□□ -1.51
VRK1-203ENST00000555067 PCDHA7Q9UN72 937 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 C19orf53Q9UNZ5 99 aaPredicted RBP5.61□□□□□ -1.51
VRK1-203ENST00000555067 LAMP3Q9UQV4 416 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 B3GNT3Q9Y2A9 372 aa5.61□□□□□ -1.51
VRK1-203ENST00000555067 PASKQ96RG2 1323 aa5.6□□□□□ -1.51
VRK1-203ENST00000555067 GXYLT2A0PJZ3 443 aa5.6□□□□□ -1.51
VRK1-203ENST00000555067 AGAP14A8MT82 685 aa5.6□□□□□ -1.51
VRK1-203ENST00000555067 H0YGN5 161 aa5.6□□□□□ -1.51
VRK1-203ENST00000555067 TNFRSF13BO14836 293 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms