RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PARD6AQ9NPB6 346 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 FBXL12Q9NXK8 326 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 USP36Q9P275 1121 aaKnown RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 HECAQ9UBI9 543 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-206ENST00000555046 SEPT3Q9UH03 358 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 IL36AQ9UHA7 158 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 GMEB2Q9UKD1 530 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 PPM1HQ9ULR3 514 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 FZD4Q9ULV1 537 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 GUCA1BQ9UMX6 200 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 PCDHA3Q9Y5H8 950 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 MIA3Q5JRA6 1907 aa10.78□□□□□ -0.68
TMEM260-206ENST00000555046 RALGAPA1Q6GYQ0 2036 aa10.77□□□□□ -0.68
TMEM260-206ENST00000555046 LRRC72A6NJI9 287 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 K7ERQ8 282 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 SLC7A4O43246 635 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 KALRNO60229 2985 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 BNIP3LO60238 219 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 IGSF6O95976 241 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 RETP07949 1114 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 GLDCP23378 1020 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 CCNCP24863 283 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 MSNP26038 577 aaKnown RBP10.77□□□□□ -0.69
TMEM260-206ENST00000555046 CTNNA2P26232 953 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 CTNNA1P35221 906 aaKnown RBP10.77□□□□□ -0.69
TMEM260-206ENST00000555046 CSNK1DP48730 415 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 RHOAP61586 193 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 MMRN1Q13201 1228 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 RALGPS1Q5JS13 557 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 MARC1Q5VT66 337 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 Q6ZVU0 165 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 RABEPKQ7Z6M1 372 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 RFX6Q8HWS3 928 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 CCDC50Q8IVM0 306 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 ATPAF2Q8N5M1 289 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 ZNF366Q8N895 744 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 KDF1Q8NAX2 398 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-206ENST00000555046 OR2AP1Q8NGE2 309 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 PCDH19Q8TAB3 1148 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 HCAR2Q8TDS4 363 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 RLN3Q8WXF3 142 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 FATE1Q969F0 183 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 RNF25Q96BH1 459 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-206ENST00000555046 TSGA13Q96PP4 275 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 CPEB1Q9BZB8 566 aaKnown RBP10.77□□□□□ -0.69
TMEM260-206ENST00000555046 KLC2Q9H0B6 622 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 DUSP15Q9H1R2 295 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-206ENST00000555046 WSB2Q9NYS7 404 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-206ENST00000555046 AMACRQ9UHK6 382 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 SALL4Q9UJQ4 1053 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 TFR2Q9UP52 801 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 FCF1Q9Y324 198 aaKnown RBP10.77□□□□□ -0.69
TMEM260-206ENST00000555046 MFHAS1Q9Y4C4 1052 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 PCDHGA5Q9Y5G8 931 aa10.77□□□□□ -0.69
TMEM260-206ENST00000555046 ADAMTS20P59510 1910 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 IGHV1OR15-9A0A0B4J2B8 117 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 C3orf70A6NLC5 250 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 SRRM3A6NNA2 597 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 J3KR12 359 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 PPP1R12AO14974 1030 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 MATN3O15232 486 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 MTSS1O43312 755 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 SMAD6O43541 496 aaKnown RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 RNASEH2AO75792 299 aaKnown RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 TMCC1O94876 653 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 TJP3O95049 919 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 CD160O95971 181 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 CD48P09326 243 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 NFKBIAP25963 317 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 GARSP41250 739 aaKnown RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 RPL6Q02878 288 aaKnown RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 HNRNPDQ14103 355 aaKnown RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 LBRQ14739 615 aaKnown RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 PPP2R5EQ16537 467 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 PLK5Q496M5 336 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 SOWAHCQ53LP3 525 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 ARSIQ5FYB1 569 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 WDR45BQ5MNZ6 344 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 N4BP2L1Q5TBK1 243 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 CCDC181Q5TID7 509 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 NCBP2-AS2Q69YL0 99 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 SLC9A4Q6AI14 798 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 DPY19L3Q6ZPD9 716 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 ARHGAP12Q8IWW6 846 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 HDDC3Q8N4P3 179 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 LRRC57Q8N9N7 239 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 CCNYQ8ND76 341 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 TRIM58Q8NG06 486 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 PIP4K2CQ8TBX8 421 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 NETO1Q8TDF5 533 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 P3H4Q92791 437 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 TOE1Q96GM8 510 aaKnown RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 TUBGCP5Q96RT8 1024 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 CINPQ9BW66 212 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-206ENST00000555046 TNKS2Q9H2K2 1166 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 CYP8B1Q9UNU6 501 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 PPP2R2CQ9Y2T4 447 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 HYOU1Q9Y4L1 999 aa10.76□□□□□ -0.69
TMEM260-206ENST00000555046 A0A1W2PQ67 120 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 GRID2IPA4D2P6 1211 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms