RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	AREL1	O15033	823 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	RANBP6	O60518	1105 aa	Known RBP	5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	PLA2G6	O60733	806 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	TCEA3	O75764	348 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	MT-CO3	P00414	261 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	ICAM1	P05362	532 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	MYL4	P12829	197 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	MX1	P20591	662 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	HAND2	P61296	217 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	GPS1	Q13098	491 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	IK	Q13123	557 aa	Predicted RBP	5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	MTAP	Q13126	283 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	PPIG	Q13427	754 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	ST3GAL2	Q16842	350 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	FAM209B	Q5JX69	171 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	ABLIM2	Q6H8Q1	611 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	ERAP2	Q6P179	960 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	BEND5	Q7L4P6	421 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	YTHDF3	Q7Z739	585 aa	Known RBP	5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	FAM160B2	Q86V87	743 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	CCDC28A	Q8IWP9	274 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	CHURC1	Q8WUH1	139 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	PRR11	Q96HE9	360 aa	Predicted RBP	5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	RIPOR3	Q96MK2	946 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	TMEM47	Q9BQJ4	181 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	NACAP1	Q9BZK3	213 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	RANBP17	Q9H2T7	1088 aa	Known RBP	5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	HIPK3	Q9H422	1215 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	CHMP4B	Q9H444	224 aa	Known RBP	5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	ARFGAP3	Q9NP61	516 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	FNIP2	Q9P278	1114 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	KLHL13	Q9P2N7	655 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	ANAPC4	Q9UJX5	808 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	CCPG1	Q9ULG6	757 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	MAN2B2	Q9Y2E5	1009 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	PARP14	Q460N5	1801 aa		5.75	□□□□□ -1.49
PSMC6-208	ENST00000554956	COL11A1	P12107	1806 aa	Predicted RBP	5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	ASB14	A6NK59	587 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	PPP6C	O00743	305 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	PRAMEF2	O60811	474 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	USP1	O94782	785 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	WDR47	O94967	919 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	FGB	P02675	491 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	CHRM5	P08912	532 aa	Predicted RBP	5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	PRR35	P0CG20	571 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	TMEM225B	P0DP42	221 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	HSPD1	P10809	573 aa	Known RBP	5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	PDHB	P11177	359 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	CD19	P15391	556 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	ADRA1D	P25100	572 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	MST1	P26927	711 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	GABRB3	P28472	473 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	PBX1	P40424	430 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	ARHGAP25	P42331	645 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	GPNMB	Q14956	572 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	CLCA4	Q14CN2	919 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	ALX1	Q15699	326 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	CCDC96	Q2M329	555 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	SLC35G1	Q2M3R5	365 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	TCTN1	Q2MV58	587 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	DUSP28	Q4G0W2	176 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	FAXC	Q5TGI0	409 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	ANKRD45	Q5TZF3	282 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	IZUMO3	Q5VZ72	239 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	RAP1GAP2	Q684P5	730 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	DENND2C	Q68D51	928 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	ZNF626	Q68DY1	528 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	TMEM65	Q6PI78	240 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	DCDC5	Q6ZRR9	648 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	KIAA0408	Q6ZU52	694 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	TBC1D10C	Q8IV04	446 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	P3H2	Q8IVL5	708 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	TXLNB	Q8N3L3	684 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	TMEM199	Q8N511	208 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	SUN3	Q8TAQ9	357 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	ADAMTS18	Q8TE60	1221 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	FYTTD1	Q96QD9	318 aa	Known RBP	5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	CTAGE1	Q96RT6	745 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	EFHD1	Q9BUP0	239 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	UBA5	Q9GZZ9	404 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	USP29	Q9HBJ7	922 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	MROH7	Q68CQ1	1323 aa		5.74	□□□□□ -1.49
PSMC6-208	ENST00000554956	CCDC189	A1A4V9	331 aa		5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	WDR91	A4D1P6	747 aa		5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	SH3BP5	O60239	455 aa		5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	SLC3A2	P08195	630 aa	Known RBP	5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	GOLGA8H	P0CJ92	632 aa		5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	SNHG28	P0DPA3	235 aa		5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	TOP1	P11387	765 aa	Known RBP	5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	ATF7	P17544	494 aa	Predicted RBP	5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	SFPQ	P23246	707 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	CALML3	P27482	149 aa		5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	CERS1	P27544	350 aa		5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	RPS6	P62753	249 aa	Known RBP	5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	GPC5	P78333	572 aa		5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	LARS2	Q15031	903 aa	Known RBP	5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	ARL13B	Q3SXY8	428 aa		5.73	□□□□□ -1.49
PSMC6-208	ENST00000554956	ARHGAP15	Q53QZ3	475 aa		5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms