RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TM6SF2Q9BZW4 377 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 TNKS2Q9H2K2 1166 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 POLMQ9NP87 494 aaPredicted RBP16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 NT5MQ9NPB1 228 aa16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 HECAQ9UBI9 543 aaPredicted RBP16.68■□□□□ 0.26
SPTLC2-203ENST00000554901 ZBTB24O43167 697 aaPredicted RBP16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 PI15O43692 258 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 RNASEH1O60930 286 aaKnown RBP16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 HLA-DQB2P05538 268 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 ACTN2P35609 894 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 CCNHP51946 323 aaPredicted RBP16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 MTAPQ13126 283 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 SLC14A2Q15849 920 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 MYLK3Q32MK0 819 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 P3H1Q32P28 736 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 CCDC137Q6PK04 289 aaKnown RBP16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 C4orf22Q6V702 233 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 DPY19L3Q6ZPD9 716 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 B4GALNT4Q76KP1 1039 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 ZNF567Q8N184 647 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 PGBD5Q8N414 524 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 ZNF366Q8N895 744 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 FAM71DQ8N9W8 422 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 TMIEQ8NEW7 156 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 SPATA4Q8NEY3 305 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 HEPHQ9BQS7 1158 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 RSPH9Q9H1X1 276 aaPredicted RBP16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 KLHL8Q9P2G9 620 aaPredicted RBP16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 PCYOX1Q9UHG3 505 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 SHROOM3Q8TF72 1996 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 CKAP5Q14008 2032 aa16.67■□□□□ 0.26
SPTLC2-203ENST00000554901 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 MUSKO15146 869 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 ALDH1A2O94788 518 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 PRNPP04156 253 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 CXCL12P48061 93 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 ZBTB16Q05516 673 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 ANKRD20A2Q5SQ80 823 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 ANKRD20A1Q5TYW2 823 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 ANKRD20A3Q5VUR7 823 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 TMEM92Q6UXU6 159 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 PID1Q7Z2X4 250 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 SRLQ86TD4 932 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 CAMKK1Q8N5S9 505 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 MNS1Q8NEH6 495 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 SLCO2A1Q92959 643 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 AGAP3Q96P47 875 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 FAM129BQ96TA1 746 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 OSBPL1AQ9BXW6 950 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 SLC25A51Q9H1U9 297 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 C10orf88Q9H8K7 445 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 GLOD4Q9HC38 313 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 ZDBF2Q9HCK1 2354 aa16.66■□□□□ 0.26
SPTLC2-203ENST00000554901 GPR37L1O60883 481 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 GAS8O95995 478 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 RGRP47804 291 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 SCNN1BP51168 640 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 ITKQ08881 620 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 DNTTIP2Q5QJE6 756 aaKnown RBP16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 ATXN7L2Q5T6C5 722 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 FAM46CQ5VWP2 391 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 KIAA1211LQ6NV74 962 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 TTC27Q6P3X3 843 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 GSTA5Q7RTV2 222 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 STK40Q8N2I9 435 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 CCDC89Q8N998 374 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 ZNF641Q96N77 438 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 GBA3Q9H227 469 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 MTG2Q9H4K7 406 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 SCUBE2Q9NQ36 999 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 IL36AQ9UHA7 158 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 PPM1HQ9ULR3 514 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 SCML1Q9UN30 329 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 PRR33A8MZF0 331 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 C1QTNF3-AMACRE9PGA6 284 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 INSIG1O15503 277 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 BNIP3LO60238 219 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 COL9A1P20849 921 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 HOXA6P31267 233 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 KCNJ1P48048 391 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 COPAP53621 1224 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 GDF10P55107 478 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 MAXP61244 160 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 SFSWAPQ12872 951 aaKnown RBP16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 ZNF776Q68DI1 518 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 NCEH1Q6PIU2 408 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 ARHGEF18Q6ZSZ5 1173 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 SYDE1Q6ZW31 735 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 RYBPQ8N488 228 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 TSTD1Q8NFU3 115 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 ARRDC2Q8TBH0 407 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 HCAR2Q8TDS4 363 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 IMP4Q96G21 291 aaKnown RBP16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 EXOC2Q96KP1 924 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 FCRL5Q96RD9 977 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 SEMA3CQ99985 751 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 C1QTNF1Q9BXJ1 281 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 CEP41Q9BYV8 373 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 ATP13A3Q9H7F0 1226 aa16.65■□□□□ 0.26
SPTLC2-203ENST00000554901 VPS45Q9NRW7 570 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms