RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 ORAI3Q9BRQ5 295 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 KDM4CQ9H3R0 1056 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 ZDHHC6Q9H6R6 413 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 SP110Q9HB58 689 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 DDX56Q9NY93 547 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 DNAH14Q0VDD8 3507 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 ATXN2Q99700 1313 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 GON4LQ3T8J9 2241 aa13.11□□□□□ -0.31
MTHFD1-208ENST00000554739 TBC1D3DA0A087WVF3 549 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 TBC1D3IA0A087WXS9 549 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 TBC1D3EA0A087X179 549 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 TBC1D3KA0A087X1G2 549 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 TBC1D3FA6NER0 549 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 FAM47DPA6NHR8 397 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 MEI4A8MW99 385 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 TBC1D3LB9A6J9 549 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 KHNYNO15037 678 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 INSIG1O15503 277 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 PSTPIP1O43586 416 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 PLRG1O43660 514 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 FSBPO95073 299 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 IGSF6O95976 241 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 TBC1D3HP0C7X1 549 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 ITGB7P26010 798 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 RGRP47804 291 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 CSNK1DP48730 415 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 CCR5P51681 352 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 IRX4P78413 519 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 GBE1Q04446 702 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 NSUN2Q08J23 767 aaKnown RBP eCLIP13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 GALNT2Q10471 571 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 KIF5AQ12840 1032 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 SLC10A2Q12908 348 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 KIAA0895LQ68EN5 471 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 TBC1D3GQ6DHY5 549 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 TBC1D3CQ6IPX1 549 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 SLC23A3Q6PIS1 610 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 MFSD7Q6UXD7 560 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 GDPD4Q6W3E5 623 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 ERN2Q76MJ5 926 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 DAAM2Q86T65 1068 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 LRRC8AQ8IWT6 810 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 TBC1D3Q8IZP1 549 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 CEP76Q8TAP6 659 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 EXOC2Q96KP1 924 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 PSKH2Q96QS6 385 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 CPEB1Q9BZB8 566 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 RXFP3Q9NSD7 469 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 EVLQ9UI08 416 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 EIF2B4Q9UI10 523 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 ADGRG1Q9Y653 693 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 CHD5Q8TDI0 1954 aa13.1□□□□□ -0.31
MTHFD1-208ENST00000554739 PLXND1Q9Y4D7 1925 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 C16orf96A6NNT2 1141 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 MUSKO15146 869 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 MFSD11O43934 449 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 GDF9O60383 454 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 KRT1P04264 644 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 UGT2B4P06133 528 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 SERPINF2P08697 491 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 CD27P26842 260 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 CDKN2BP42772 138 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 MARCKSL1P49006 195 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 LMNB2Q03252 620 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 RAD51Q06609 339 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 CCDC15Q0P6D6 951 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 LBRQ14739 615 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 DUOXA1Q1HG43 343 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 ZNF805Q5CZA5 627 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 TRIM61Q5EBN2 209 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 TMCO4Q5TGY1 634 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 SLC9A4Q6AI14 798 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 SRLQ86TD4 932 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 KATNAL2Q8IYT4 538 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 TXLNBQ8N3L3 684 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 ATPAF2Q8N5M1 289 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 PLD5Q8N7P1 536 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 LRRC57Q8N9N7 239 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 C12orf50Q8NA57 414 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 CCDC112Q8NEF3 446 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 KIAA1524Q8TCG1 905 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 PPP1R16AQ96I34 528 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 KLHL32Q96NJ5 620 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 TSGA13Q96PP4 275 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 OSBPL1AQ9BXW6 950 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 MIR1-1HGQ9H1L0 117 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 EBF2Q9HAK2 575 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 CAPN10Q9HC96 672 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 DYRK4Q9NR20 520 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 DTLQ9NZJ0 730 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 TRIM10Q9UDY6 481 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 SUSD2Q9UGT4 822 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 SEPT3Q9UH03 358 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 SLC6A14Q9UN76 642 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 SLCO1B1Q9Y6L6 691 aa13.09□□□□□ -0.31
MTHFD1-208ENST00000554739 SPAG17Q6Q759 2223 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms