RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PYM1Q9BRP8 204 aaKnown RBP4.44□□□□□ -1.7
VTI1B-203ENST00000554636 MTMR12Q9C0I1 747 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 LRRC27Q9C0I9 530 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 ZCWPW1Q9H0M4 648 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 GOLPH3LQ9H4A5 285 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 ZNF768Q9H5H4 540 aaKnown RBP4.44□□□□□ -1.7
VTI1B-203ENST00000554636 PDE11AQ9HCR9 933 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 ZNF334Q9HCZ1 680 aaPredicted RBP4.44□□□□□ -1.7
VTI1B-203ENST00000554636 AGPAT3Q9NRZ7 376 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 TRPS1Q9UHF7 1281 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 SIX4Q9UIU6 781 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 CFAP45Q9UL16 551 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 MAFFQ9ULX9 164 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 L1RE1Q9UN81 338 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 MIA3Q5JRA6 1907 aa4.44□□□□□ -1.7
VTI1B-203ENST00000554636 GREB1Q4ZG55 1949 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 MYO15AQ9UKN7 3530 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 A0A1B0GVL5 298 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 PVALEFA0A1B0GWK0 134 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 SHISA7A6NL88 538 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 PRR5-ARHGAP8B1AHC4 643 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CYB561D2O14569 222 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CLIC2O15247 247 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 HCRTO43612 131 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 ECI2O75521 394 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 SOAT2O75908 522 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 LDHAP00338 332 aaKnown RBP4.43□□□□□ -1.7
VTI1B-203ENST00000554636 TMEM191BP0C7N4 346 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 GJA1P17302 382 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 PTPN2P17706 415 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 ATF6P18850 670 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CMA1P23946 247 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CTSSP25774 331 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 ADSLP30566 484 aaPredicted RBP4.43□□□□□ -1.7
VTI1B-203ENST00000554636 ELF1P32519 619 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 PNPLA4P41247 253 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 MASP1P48740 699 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CLCN5P51795 746 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 NDUFA8P51970 172 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 SNRPFP62306 86 aaKnown RBP4.43□□□□□ -1.7
VTI1B-203ENST00000554636 KRT85P78386 507 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 TFAMQ00059 246 aaKnown RBP4.43□□□□□ -1.7
VTI1B-203ENST00000554636 APBA1Q02410 837 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CYP24A1Q07973 514 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 BFSP1Q12934 665 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 PLD1Q13393 1074 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 STAT4Q14765 748 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 PSMD6Q15008 389 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 TEAD2Q15562 447 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CCDC142Q17RM4 750 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 LHFPL2Q6ZUX7 228 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 MTSS1LQ765P7 747 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 WDR49Q8IV35 697 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 NELFCDQ8IXH7 590 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 C12orf56Q8IXR9 622 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CCDC105Q8IYK2 499 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 LILRA3Q8N6C8 439 aaPredicted RBP4.43□□□□□ -1.7
VTI1B-203ENST00000554636 LRRC52Q8N7C0 313 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 LEMD2Q8NC56 503 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 OR52N2Q8NGI0 321 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 SPATA18Q8TC71 538 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 SNX33Q8WV41 574 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 RSPRY1Q96DX4 576 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 MCRS1Q96EZ8 462 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 PAGE5Q96GU1 130 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 PKMYT1Q99640 499 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CGRRF1Q99675 332 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 KXD1Q9BQD3 176 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 MENTQ9BUN1 341 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 MLST8Q9BVC4 326 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 PLA2G2FQ9BZM2 168 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 SLITRK6Q9H5Y7 841 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 TBC1D17Q9HA65 648 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 ASAH2Q9NR71 780 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 ARHGEF3Q9NR81 526 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 TMLHEQ9NVH6 421 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 INTS13Q9NVM9 706 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 GDAP2Q9NXN4 497 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 GDE1Q9NZC3 331 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 TRPM5Q9NZQ8 1165 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 HSFX1Q9UBD0 423 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 WNT16Q9UBV4 365 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 ITGA11Q9UKX5 1188 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CA14Q9ULX7 337 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.43□□□□□ -1.7
VTI1B-203ENST00000554636 NME7Q9Y5B8 376 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 CACNA1IQ9P0X4 2223 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 PATJQ8NI35 1801 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 FANCMQ8IYD8 2048 aa4.43□□□□□ -1.7
VTI1B-203ENST00000554636 TICRRQ7Z2Z1 1910 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 ANAPC1Q9H1A4 1944 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 FAM186AA6NE01 2351 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 VPS13AQ96RL7 3174 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 A0A087X1B8 175 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 ZNF233A6NK53 670 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 LRRIQ3A6PVS8 624 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-203ENST00000554636 KPNA7A9QM74 516 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 LEFTY2O00292 366 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 ZNF197O14709 1029 aa4.42□□□□□ -1.7
VTI1B-203ENST00000554636 GABRDO14764 452 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms