RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 FAM90A10PA6NDY2 464 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 TNFRSF13BO14836 293 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-211ENST00000554437 MMP3P08254 477 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 ARSBP15848 533 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 GPR12P47775 334 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 CDH15P55291 814 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 DUSP6Q16828 381 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 PALB2Q86YC2 1186 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 ZNF366Q8N895 744 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 TNIP2Q8NFZ5 429 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 GDPD5Q8WTR4 605 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 SLC35F5Q8WV83 523 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 ASB5Q8WWX0 329 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 ELP4Q96EB1 424 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 TBATAQ96M53 351 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 INTS2Q9H0H0 1204 aaKnown RBP5.36□□□□□ -1.55
SCFD1-211ENST00000554437 CATSPERBQ9H7T0 1116 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 WDR6Q9NNW5 1121 aaKnown RBP5.36□□□□□ -1.55
SCFD1-211ENST00000554437 IL1RAPL1Q9NZN1 696 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 GJD2Q9UKL4 321 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 CRYL1Q9Y2S2 319 aa5.36□□□□□ -1.55
SCFD1-211ENST00000554437 CACNA1IQ9P0X4 2223 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 ARHGAP10A1A4S6 786 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 EYA2O00167 538 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 OAZ2O95190 189 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 CLDN7O95471 211 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 AGR2O95994 175 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 CDC25AP30304 524 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 RPP30P78346 268 aaKnown RBP5.35□□□□□ -1.55
SCFD1-211ENST00000554437 SLC18A2Q05940 514 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 GALNT2Q10471 571 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 GPR68Q15743 365 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 NAA35Q5VZE5 725 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 NCAPH2Q6IBW4 605 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 ZNF549Q6P9A3 640 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 C17orf99Q6UX52 265 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 FAM83HQ6ZRV2 1179 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-211ENST00000554437 CADM3Q8N126 398 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 Q8N9P0 234 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-211ENST00000554437 NAF1Q96HR8 494 aaKnown RBP5.35□□□□□ -1.55
SCFD1-211ENST00000554437 GFM1Q96RP9 751 aaKnown RBP5.35□□□□□ -1.55
SCFD1-211ENST00000554437 EIF2AK1Q9BQI3 630 aaKnown RBP5.35□□□□□ -1.55
SCFD1-211ENST00000554437 TTYH1Q9H313 450 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-211ENST00000554437 PLAC1Q9HBJ0 212 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 WASH6PQ9NQA3 447 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 MAP3K20Q9NYL2 800 aaKnown RBP5.35□□□□□ -1.55
SCFD1-211ENST00000554437 PEMTQ9UBM1 199 aa5.35□□□□□ -1.55
SCFD1-211ENST00000554437 GOLGA6L10A0A0M3HER8 536 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 PABPN1LA6NDY0 278 aaKnown RBP5.34□□□□□ -1.55
SCFD1-211ENST00000554437 BECN2A8MW95 431 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 TEX22C9J3V5 150 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 MAN1A1P33908 653 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 KCNJ4P48050 445 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 TUBP50607 506 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 BLKP51451 505 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 LINC00205P59089 165 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 ZP1P60852 638 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 ALFQ53S48 1182 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 OTUD1Q5VV17 481 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-211ENST00000554437 LVRNQ6Q4G3 990 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 MOB3CQ70IA8 216 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 HEATR4Q86WZ0 1026 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 TBC1D22AQ8WUA7 517 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 ZBTB10Q96DT7 871 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 URB1-AS1Q96HZ7 61 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 APOPT1Q96IL0 206 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 APOLD1Q96LR9 279 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 FUZQ9BT04 418 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 BEX4Q9NWD9 120 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-211ENST00000554437 PCDHGB5Q9Y5G0 923 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 INSL5Q9Y5Q6 135 aa5.34□□□□□ -1.55
SCFD1-211ENST00000554437 MS4A18H0YCH9 400 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 I6L893 689 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-211ENST00000554437 TNPO2O14787 897 aaKnown RBP5.33□□□□□ -1.56
SCFD1-211ENST00000554437 LIASO43766 372 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 URODP06132 367 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 CTPS1P17812 591 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 GGT5P36269 586 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 RFX2P48378 723 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 PGGT1BP53609 377 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 PMS2P54278 862 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 TRAF1Q13077 416 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 CAMK1Q14012 370 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 MAPRE1Q15691 268 aaKnown RBP5.33□□□□□ -1.56
SCFD1-211ENST00000554437 ZNF766Q5HY98 468 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 ZNF667Q5HYK9 610 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 ATG9BQ674R7 924 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 MMS22LQ6ZRQ5 1243 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 ZNF367Q7RTV3 350 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 LURAP1LQ8IV03 231 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 RBFAQ8N0V3 343 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 PELI3Q8N2H9 469 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 ZMIZ2Q8NF64 920 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 ZCCHC10Q8TBK6 192 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 TMEM170AQ8WVE7 144 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 TMEM18Q96B42 140 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 RNF183Q96D59 192 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 SF3B5Q9BWJ5 86 aaKnown RBP5.33□□□□□ -1.56
SCFD1-211ENST00000554437 ZHX3Q9H4I2 956 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 EBF3Q9H4W6 596 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms