RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TCRBV5S2A0A599 114 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 TMEM110-MUSTN1A8MSY1 372 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 HGSO14964 777 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ALOX15BO15296 676 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 MAFGO15525 162 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 LINC01565O15544 149 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 CLDN3O15551 220 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ZNF189O75820 626 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 CRTAMO95727 393 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 LDHAP00338 332 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 CFBP00751 764 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 LGALS2P05162 132 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 CALB1P05937 261 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 TPBGLP0DKB5 382 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 DLATP10515 647 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 MYCLP12524 364 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 UNGP13051 313 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 NCAM1P13591 858 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 UBA1P22314 1058 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 CA4P22748 312 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 KLRC2P26717 231 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ICAM3P32942 547 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 GCLMP48507 274 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 HSD17B4P51659 736 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 VCPP55072 806 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 GEMIN4P57678 1058 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 XIAPP98170 497 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ROR2Q01974 943 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 PPP3CAQ08209 521 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 DMP1Q13316 513 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 PIGHQ14442 188 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 SNRNP35Q16560 246 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 KYNUQ16719 465 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 MUM1Q2TAK8 710 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ACCSLQ4AC99 568 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ZC2HC1CQ53FD0 456 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 TRIM61Q5EBN2 209 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 LGSNQ5TDP6 509 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 STEAP3Q658P3 488 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 OTUD6AQ7L8S5 288 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 OTOP3Q7RTS5 596 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 GSTA5Q7RTV2 222 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 HAUS6Q7Z4H7 955 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 POLNQ7Z5Q5 900 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 FGD2Q7Z6J4 655 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 RSPH3Q86UC2 560 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ARHGEF19Q8IW93 802 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 SRRM1Q8IYB3 904 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 MCOLN2Q8IZK6 566 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ANKRD42Q8N9B4 389 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 MCPH1Q8NEM0 835 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 PARD3BQ8TEW8 1205 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 SLC20A1Q8WUM9 679 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 DDX1Q92499 740 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 STMN2Q93045 179 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 NKD2Q969F2 451 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ZNF689Q96CS4 500 aaPredicted RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ERP27Q96DN0 273 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 BICD1Q96G01 975 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 TSC22D3Q99576 134 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 MXRA8Q9BRK3 442 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 NTPCRQ9BSD7 190 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 OSBPL8Q9BZF1 889 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 STN1Q9H668 368 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 SYNCQ9H7C4 482 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 POLD4Q9HCU8 107 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ALG13Q9NP73 1137 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 PARVAQ9NVD7 372 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 TAS2R14Q9NYV8 317 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 NDOR1Q9UHB4 597 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 ZFP69BQ9UJL9 534 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 CNOT6Q9ULM6 557 aaKnown RBP6.09□□□□□ -1.43
VPS33B-203ENST00000554264 STK38LQ9Y2H1 464 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 IRAK3Q9Y616 596 aa6.09□□□□□ -1.43
VPS33B-203ENST00000554264 NRCAMQ92823 1304 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 MAGEA13PA6NCF6 341 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 ENO4A6NNW6 628 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 H0Y858 1186 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 PDLIM1O00151 329 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 AQP7O14520 342 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 TP73O15350 636 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 NVLO15381 856 aaKnown RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 MAGEC1O60732 1142 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 PEX11AO75192 247 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 STAM2O75886 525 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 DGKIO75912 1065 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 HAUS5O94927 633 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 RASGRP1O95267 797 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 CYP1A1P04798 512 aaPredicted RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 RPLP2P05387 115 aaKnown RBP6.08□□□□□ -1.44
VPS33B-203ENST00000554264 ITGB1P05556 798 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 KRT7P08729 469 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 WEE2P0C1S8 567 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 SRGAP2BP0DMP2 458 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 PAX7P23759 505 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 CCND2P30279 289 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 NBL1P41271 181 aa6.08□□□□□ -1.44
VPS33B-203ENST00000554264 NRIP1P48552 1158 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms