RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 MUC3BQ9H195 1237 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 FANCLQ9NW38 375 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 DNAJC28Q9NX36 388 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 TAB2Q9NYJ8 693 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 MPP6Q9NZW5 540 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 GGT7Q9UJ14 662 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 PCDHGC3Q9UN70 934 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 SATB2Q9UPW6 733 aa11.79□□□□□ -0.52
TUBB3-204ENST00000554116 EME2A4GXA9 379 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-204ENST00000554116 K7ENP7 123 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 SLC28A2O43868 658 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 DAB1O75553 588 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 GCATO75600 419 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 ENDOD1O94919 500 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 PCDH8O95206 1070 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 GKP32189 559 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 NOS2P35228 1153 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 CLCN1P35523 988 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 ABL2P42684 1182 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 BPIFB4P59827 614 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 ARF5P84085 180 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 SLC6A3Q01959 620 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 VAC14Q08AM6 782 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 STX1AQ16623 288 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 CDKN3Q16667 212 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 CDKAL1Q5VV42 579 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 KIAA1614Q5VZ46 1190 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 INO80CQ6PI98 192 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-204ENST00000554116 CRTC1Q6UUV9 634 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 C11orf57Q6ZUT1 292 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-204ENST00000554116 PARS2Q7L3T8 475 aaKnown RBP11.78□□□□□ -0.52
TUBB3-204ENST00000554116 TFAP2DQ7Z6R9 452 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 SLC47A2Q86VL8 602 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 DCAF4L2Q8NA75 395 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 C1orf131Q8NDD1 294 aaKnown RBP11.78□□□□□ -0.52
TUBB3-204ENST00000554116 RNF34Q969K3 372 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 PGAP3Q96FM1 320 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-204ENST00000554116 C1QTNF2Q9BXJ5 285 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 DPH1Q9BZG8 443 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 TKTL2Q9H0I9 626 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 IL36AQ9UHA7 158 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 CSNK1G3Q9Y6M4 447 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 UNC13CQ8NB66 2214 aa11.78□□□□□ -0.52
TUBB3-204ENST00000554116 A6NNZ2 444 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 PRNPP04156 253 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 RHOCP08134 193 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 ADRB3P13945 408 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 UCHL3P15374 230 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 L1CAMP32004 1257 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 CSRP3P50461 194 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 PFN3P60673 137 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 HNRNPKP61978 463 aaKnown RBP eCLIP11.77□□□□□ -0.53
TUBB3-204ENST00000554116 KRT83P78385 493 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 MYL5Q02045 173 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 CLN3Q13286 438 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 KRT31Q15323 416 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 DEFB133Q30KQ1 61 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 RAB6CQ53S08 254 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 C3orf38Q5JPI3 329 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 ZCCHC8Q6NZY4 707 aaKnown RBP11.77□□□□□ -0.53
TUBB3-204ENST00000554116 NYAP1Q6ZVC0 841 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 EFL1Q7Z2Z2 1120 aaKnown RBP11.77□□□□□ -0.53
TUBB3-204ENST00000554116 PTAR1Q7Z6K3 402 aaPredicted RBP11.77□□□□□ -0.53
TUBB3-204ENST00000554116 SETD3Q86TU7 594 aaPredicted RBP11.77□□□□□ -0.53
TUBB3-204ENST00000554116 SLC35F3Q8IY50 421 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 FAM71AQ8IYT1 594 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 RBFAQ8N0V3 343 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 EXD3Q8N9H8 876 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 MAPK15Q8TD08 544 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 LENG8Q96PV6 779 aaPredicted RBP11.77□□□□□ -0.53
TUBB3-204ENST00000554116 PPP1R9BQ96SB3 815 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 C2orf49Q9BVC5 232 aaPredicted RBP11.77□□□□□ -0.53
TUBB3-204ENST00000554116 BOCQ9BWV1 1114 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 NAA15Q9BXJ9 866 aaKnown RBP11.77□□□□□ -0.53
TUBB3-204ENST00000554116 CLPBQ9H078 707 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 RAB6CQ9H0N0 254 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 PDCL3Q9H2J4 239 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 USP29Q9HBJ7 922 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 PLCB1Q9NQ66 1216 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 NDFIP2Q9NV92 336 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 TMEM63CQ9P1W3 806 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 ITM2BQ9Y287 266 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 FHOD1Q9Y613 1164 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 LRP4O75096 1905 aa11.77□□□□□ -0.53
TUBB3-204ENST00000554116 FAM170AA1A519 330 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 CPED1A4D0V7 1026 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 NEMP2A6NFY4 417 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 IGLON5A6NGN9 336 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 AQP9O43315 295 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 AP1G1O43747 822 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 NOBOXO60393 691 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 ALPPL2P10696 532 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 CDK11BP21127 795 aaKnown RBP11.76□□□□□ -0.53
TUBB3-204ENST00000554116 ITGB7P26010 798 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 FLT3P36888 993 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 SERPINH1P50454 418 aaKnown RBP11.76□□□□□ -0.53
TUBB3-204ENST00000554116 CLCN6P51797 869 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 MAPK8IP2Q13387 824 aaPredicted RBP11.76□□□□□ -0.53
TUBB3-204ENST00000554116 HS1BP3Q53T59 392 aa11.76□□□□□ -0.53
TUBB3-204ENST00000554116 BRMS1LQ5PSV4 323 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms