RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 TKTL2Q9H0I9 626 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 PRORYQ9H606 182 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 WDCPQ9H6R7 721 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 KLHL11Q9NVR0 708 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 UCKL1Q9NWZ5 548 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 DNAJC28Q9NX36 388 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 VPS51Q9UID3 782 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 CDC23Q9UJX2 597 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 STAP1Q9ULZ2 295 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 PCDHB1Q9Y5F3 818 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 ASXL3Q9C0F0 2248 aa9.03□□□□□ -0.96
TDP1-208ENST00000553989 LOC400499M0QZD8 3231 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 TEX51A0A1B0GUA7 166 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 FAM170AA1A519 330 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 NEMP2A6NFY4 417 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 A6NNZ2 444 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 C10orf142B7Z368 130 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 H3BM21 787 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 K7ERQ8 282 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 TK2O00142 265 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 PIAS2O75928 621 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 CNTN5O94779 1100 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 MT-CO1P00395 513 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 ERBB2P04626 1255 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 MPOP05164 745 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 CTSLP07711 333 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 SLC9A1P19634 815 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 MCM3P25205 808 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 OR1E1P30953 314 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 NOS2P35228 1153 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 DUSP3P51452 185 aaPredicted RBP9.02□□□□□ -0.97
TDP1-208ENST00000553989 DNA2P51530 1060 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 COPB1P53618 953 aaKnown RBP9.02□□□□□ -0.97
TDP1-208ENST00000553989 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.97
TDP1-208ENST00000553989 TAS2R38P59533 333 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 GABREP78334 506 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 SLC6A3Q01959 620 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 APBA1Q02410 837 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 DEUP1Q05D60 604 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 EIF4EBP2Q13542 120 aaPredicted RBP9.02□□□□□ -0.97
TDP1-208ENST00000553989 TERF2Q15554 542 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 EXOC3L4Q17RC7 722 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 ALFQ53S48 1182 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 ZNF542PQ5EBM4 170 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 TCP11X2Q5H9J9 407 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 SEL1L3Q68CR1 1132 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 NEK5Q6P3R8 708 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 C22orf39Q6P5X5 142 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 FOXR2Q6PJQ5 311 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 OLFML1Q6UWY5 402 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 GBP6Q6ZN66 633 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 ZNF662Q6ZS27 426 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 ERN2Q76MJ5 926 aaKnown RBP9.02□□□□□ -0.97
TDP1-208ENST00000553989 C14orf80Q86SX3 495 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 ERICH1Q86X53 443 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 SPACA3Q8IXA5 215 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 SLC25A45Q8N413 288 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 DCAF4L2Q8NA75 395 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 TMEM145Q8NBT3 493 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 ZNF248Q8NDW4 579 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 TMIEQ8NEW7 156 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 OR13H1Q8NG92 308 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 OR8K1Q8NGG5 319 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 RFFLQ8WZ73 363 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 ARRDC3Q96B67 414 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 ALG14Q96F25 216 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 SPON2Q9BUD6 331 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 OSBPL2Q9H1P3 480 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 TNKS2Q9H2K2 1166 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 ARFGAP3Q9NP61 516 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 PLCB1Q9NQ66 1216 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 PLSCR2Q9NRY7 297 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 PIGVQ9NUD9 493 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.02□□□□□ -0.97
TDP1-208ENST00000553989 APEX2Q9UBZ4 518 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 IL36AQ9UHA7 158 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 IPO11Q9UI26 975 aaKnown RBP9.02□□□□□ -0.97
TDP1-208ENST00000553989 HS3ST2Q9Y278 367 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 TBC1D30Q9Y2I9 924 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 MRFAP1Q9Y605 127 aa9.02□□□□□ -0.97
TDP1-208ENST00000553989 IGSF10Q6WRI0 2623 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 CCDC66A2RUB6 948 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 CTAGE9A4FU28 777 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 SNPHO15079 494 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 SRGAP2O75044 1071 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 MFAP3LO75121 409 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 USP12O75317 370 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 CSO75390 466 aaKnown RBP9.01□□□□□ -0.97
TDP1-208ENST00000553989 ERLIN1O75477 346 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 LEFTY1O75610 366 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 ZRANB2O95218 330 aaKnown RBP eCLIP9.01□□□□□ -0.97
TDP1-208ENST00000553989 CKMT1AP12532 417 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 MYF5P13349 255 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 MTIF2P46199 727 aaKnown RBP9.01□□□□□ -0.97
TDP1-208ENST00000553989 NEK3P51956 506 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 HNRNPKP61978 463 aaKnown RBP eCLIP9.01□□□□□ -0.97
TDP1-208ENST00000553989 TLE3Q04726 772 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 QPCTQ16769 361 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 WHAMMP3Q1A5X7 153 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 ZNF284Q2VY69 593 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms