RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ASIC2Q16515 512 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 SLC18A3Q16572 532 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 AP5B1Q2VPB7 878 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 WDR45BQ5MNZ6 344 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 PRSS45Q7RTY3 260 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 CLIP4Q8N3C7 705 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 HSPH1Q92598 858 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 MMTAG2Q9BU76 263 aaKnown RBP3.5□□□□□ -1.85
VRK1-202ENST00000553683 CTDSP1Q9GZU7 261 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 TAOK3Q9H2K8 898 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 HDAC6Q9UBN7 1215 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 PLEKHB1Q9UF11 243 aaPredicted RBP3.5□□□□□ -1.85
VRK1-202ENST00000553683 INSL5Q9Y5Q6 135 aa3.5□□□□□ -1.85
VRK1-202ENST00000553683 A0A1B0GVT2 93 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 TARSL2A2RTX5 802 aaKnown RBP3.49□□□□□ -1.85
VRK1-202ENST00000553683 DDTLA6NHG4 134 aaPredicted RBP3.49□□□□□ -1.85
VRK1-202ENST00000553683 FAM90A7PA6NKC0 464 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 SH2D7A6NKC9 451 aaPredicted RBP3.49□□□□□ -1.85
VRK1-202ENST00000553683 FAM90A22PA8MWA6 464 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 FAM90A12PA8MX19 464 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 FAM90A23PA8MXZ1 464 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 CHL1O00533 1208 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 GUCY1B2O75343 617 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 CBX6O95503 412 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 WEE2P0C1S8 567 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 FGF3P11487 239 aaPredicted RBP3.49□□□□□ -1.85
VRK1-202ENST00000553683 PTPN2P17706 415 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 RXRAP19793 462 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 DCTDP32321 178 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 ARSFP54793 590 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 SLC18A2Q05940 514 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 TAF5Q15542 800 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 ZNF284Q2VY69 593 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 INO80DQ53TQ3 878 aaPredicted RBP3.49□□□□□ -1.85
VRK1-202ENST00000553683 SH2D4BQ5SQS7 431 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 IL20RBQ6UXL0 311 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 LDHAL6AQ6ZMR3 332 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 C18orf65Q6ZTR6 163 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 RBM23Q86U06 439 aaKnown RBP3.49□□□□□ -1.85
VRK1-202ENST00000553683 DENND6AQ8IWF6 608 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 GHDCQ8N2G8 530 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 OR14A16Q8NHC5 309 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 ADAMTS15Q8TE58 950 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 TBC1D22AQ8WUA7 517 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 RAB40AQ8WXH6 277 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 HERVK_113Q902F9 699 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 NEUROG1Q92886 237 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 RNF183Q96D59 192 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 MED30Q96HR3 178 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 ZSCAN31Q96LW9 406 aaPredicted RBP3.49□□□□□ -1.85
VRK1-202ENST00000553683 COG8Q96MW5 612 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 CTAGE1Q96RT6 745 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 REEP2Q9BRK0 252 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 TM6SF1Q9BZW5 370 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 CDT1Q9H211 546 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 STN1Q9H668 368 aaKnown RBP3.49□□□□□ -1.85
VRK1-202ENST00000553683 MVB12BQ9H7P6 319 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 ITM2CQ9NQX7 267 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 SPATS2LQ9NUQ6 558 aaKnown RBP3.49□□□□□ -1.85
VRK1-202ENST00000553683 ANKRD10Q9NXR5 420 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 NLKQ9UBE8 527 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 AGO1Q9UL18 857 aaKnown RBP3.49□□□□□ -1.85
VRK1-202ENST00000553683 LRP12Q9Y561 859 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 PCDHGB3Q9Y5G1 929 aa3.49□□□□□ -1.85
VRK1-202ENST00000553683 GTPBP1O00178 669 aaKnown RBP3.48□□□□□ -1.85
VRK1-202ENST00000553683 WNT9BO14905 357 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 ADAP00813 363 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 FCGR1AP12314 374 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 CTPS1P17812 591 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 TTKP33981 857 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 PCYT1AP49585 367 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 DSCR9P59020 149 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 VAMP2P63027 116 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 TLE2Q04725 743 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 UBE3AQ05086 875 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.48□□□□□ -1.85
VRK1-202ENST00000553683 HLFQ16534 295 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 ME3Q16798 604 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 ZNF324BQ6AW86 544 aaPredicted RBP3.48□□□□□ -1.85
VRK1-202ENST00000553683 NADSYN1Q6IA69 706 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 CAPRIN2Q6IMN6 1127 aaKnown RBP3.48□□□□□ -1.85
VRK1-202ENST00000553683 KLHL24Q6TFL4 600 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.48□□□□□ -1.85
VRK1-202ENST00000553683 CPXM2Q8N436 756 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 NUDCD2Q8WVJ2 157 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 CNOT9Q92600 299 aaKnown RBP3.48□□□□□ -1.85
VRK1-202ENST00000553683 RILPL2Q969X0 211 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 GCC1Q96CN9 775 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 APOLD1Q96LR9 279 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 SLC25A33Q9BSK2 321 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 MSTO1Q9BUK6 570 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 SLCO5A1Q9H2Y9 848 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 CXorf56Q9H5V9 222 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 WDR6Q9NNW5 1121 aaKnown RBP3.48□□□□□ -1.85
VRK1-202ENST00000553683 GPR52Q9Y2T5 361 aa3.48□□□□□ -1.85
VRK1-202ENST00000553683 A0A0U1RQJ8 604 aa3.47□□□□□ -1.85
VRK1-202ENST00000553683 A0A1B0GVM2 712 aa3.47□□□□□ -1.85
VRK1-202ENST00000553683 ARHGAP10A1A4S6 786 aa3.47□□□□□ -1.85
VRK1-202ENST00000553683 PRSS44E7EML9 344 aa3.47□□□□□ -1.85
VRK1-202ENST00000553683 ITM2AO43736 263 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms