RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CCDC105Q8IYK2 499 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 EFHBQ8N7U6 833 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF557Q8N988 423 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 BBOF1Q8ND07 529 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 GDPD5Q8WTR4 605 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 SMG7Q92540 1137 aaKnown RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 RAPGEF5Q92565 580 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 RUBCNQ92622 972 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 E2F7Q96AV8 911 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 TBC1D31Q96DN5 1066 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 SLC39A13Q96H72 371 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 MS4A14Q96JA4 679 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 RHOVQ96L33 236 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 RIPOR3Q96MK2 946 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 HEMGNQ9BXL5 484 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 SIK2Q9H0K1 926 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 RAB17Q9H0T7 212 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 DUSP15Q9H1R2 295 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 PCDH18Q9HCL0 1135 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 TRPC7Q9HCX4 862 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 CD320Q9NPF0 282 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 PIGVQ9NUD9 493 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 HAUS2Q9NVX0 235 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 OSER1Q9NX31 292 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 TBC1D14Q9P2M4 693 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 DNMT3BQ9UBC3 853 aaKnown RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 PPARGC1AQ9UBK2 798 aaKnown RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 NUDT5Q9UKK9 219 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 UTP11Q9Y3A2 253 aaKnown RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 HCFC2Q9Y5Z7 792 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 ANAPC1Q9H1A4 1944 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 E2F8A0AVK6 867 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TARSL2A2RTX5 802 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 C3orf70A6NLC5 250 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 F5H5T6 163 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 H7C0C1 242 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 SLC9A3R1O14745 358 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 PPP1R12AO14974 1030 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 MCF2LO15068 1137 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 MTSS1O43312 755 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 COCHO43405 550 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ERLIN1O75477 346 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 STK10O94804 968 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 CSPG5O95196 566 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 HTR3BO95264 441 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TBX18O95935 607 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 GAS8O95995 478 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 CYBBP04839 570 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 HMBSP08397 361 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 KRT10P13645 584 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TCF3P15923 654 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ERCC2P18074 760 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 EPHB2P29323 1055 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 COILP38432 576 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ATP5OP48047 213 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 MARCKSL1P49006 195 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ATXN1P54253 815 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 YBEYP58557 167 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 PITX1P78337 314 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF33AQ06730 810 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 KLF1Q13351 362 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ADAM15Q13444 863 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 BYSLQ13895 437 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 PAFAH1B3Q15102 231 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 PDK1Q15118 436 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TAZQ16635 292 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 CYP1B1Q16678 543 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 GAB4Q2WGN9 574 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TEX35Q5T0J7 233 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ADGRF1Q5T601 910 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 GPR158Q5T848 1215 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 DCAF12L1Q5VU92 463 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TXNDC8Q6A555 127 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 SLC9A4Q6AI14 798 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TXNRD3NBQ6F5E7 133 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ANKRD54Q6NXT1 300 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 C8orf74Q6P047 294 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 DARS2Q6PI48 645 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 CCDC137Q6PK04 289 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TMCO3Q6UWJ1 677 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ATG14Q6ZNE5 492 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 RFX8Q6ZV50 586 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 HTR3DQ70Z44 454 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 GAREM2Q75VX8 874 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 GSTA5Q7RTV2 222 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 REC114Q7Z4M0 266 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ADAT2Q7Z6V5 191 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 PCGF5Q86SE9 256 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 TSPYL5Q86VY4 417 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 KLHL7Q8IXQ5 586 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 IFT20Q8IY31 132 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 CMTM8Q8IZV2 173 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 LILRA2Q8N149 483 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 CELF5Q8N6W0 485 aaKnown RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 CCDC185Q8N715 623 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 ARL14EPQ8N8R7 260 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-202ENST00000553619 MAB21L3Q8N8X9 362 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 NSMCE1Q8WV22 266 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 RSAD2Q8WXG1 361 aa5.14□□□□□ -1.59
VTI1B-202ENST00000553619 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms