RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ADGRG1Q9Y653 693 aa23.16■■□□□ 1.3
TDP1-206ENST00000553569 LRRC72A6NJI9 287 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 METTL12A8MUP2 240 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 ZNF487B1APH4 448 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 INSIG1O15503 277 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 MAFKO60675 156 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 POP4O95707 220 aaKnown RBP23.15■■□□□ 1.3
TDP1-206ENST00000553569 UGT2B4P06133 528 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 TGM1P22735 817 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 RAD51Q06609 339 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 GALNT2Q10471 571 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 RFTN1Q14699 578 aaPredicted RBP23.15■■□□□ 1.3
TDP1-206ENST00000553569 CSRP2Q16527 193 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 WDR45BQ5MNZ6 344 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 PLA2G2CQ5R387 149 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 VSIG1Q86XK7 387 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 TSEN2Q8NCE0 465 aaKnown RBP23.15■■□□□ 1.3
TDP1-206ENST00000553569 OR2T34Q8NGX1 318 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 MIR1-1HGQ9H1L0 117 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 PCED1AQ9H1Q7 454 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 VPS45Q9NRW7 570 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 PILRBQ9UKJ0 227 aa23.15■■□□□ 1.3
TDP1-206ENST00000553569 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.15■■□□□ 1.3
TDP1-206ENST00000553569 PATE3B3GLJ2 98 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 APOL1O14791 398 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 SLC7A4O43246 635 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 NRDCO43847 1150 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 ITGB7P26010 798 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 GARSP41250 739 aaKnown RBP23.14■■□□□ 1.29
TDP1-206ENST00000553569 RGRP47804 291 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 DYNLT1P63172 113 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 CCZ1BP86790 482 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 CCZ1P86791 482 aaPredicted RBP23.14■■□□□ 1.29
TDP1-206ENST00000553569 ZNF235Q14590 738 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 LBRQ14739 615 aaKnown RBP23.14■■□□□ 1.29
TDP1-206ENST00000553569 LLGL1Q15334 1064 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 IFI16Q16666 785 aaKnown RBP23.14■■□□□ 1.29
TDP1-206ENST00000553569 PIP5KL1Q5T9C9 394 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 KIAA0895LQ68EN5 471 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 PRR23CQ6ZRP0 262 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 CCDC50Q8IVM0 306 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 KATNAL2Q8IYT4 538 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 KIAA1524Q8TCG1 905 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 NSMCE1Q8WV22 266 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 ZNF599Q96NL3 588 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 SEPT3Q9UH03 358 aa23.14■■□□□ 1.29
TDP1-206ENST00000553569 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.14■■□□□ 1.29
TDP1-206ENST00000553569 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.14■■□□□ 1.29
TDP1-206ENST00000553569 PTPRZ1P23471 2315 aaPredicted RBP23.13■■□□□ 1.29
TDP1-206ENST00000553569 TBC1D3DA0A087WVF3 549 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 TBC1D3IA0A087WXS9 549 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 TBC1D3EA0A087X179 549 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 TBC1D3KA0A087X1G2 549 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 TBC1D3FA6NER0 549 aaPredicted RBP23.13■■□□□ 1.29
TDP1-206ENST00000553569 TBC1D3LB9A6J9 549 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 PLRG1O43660 514 aaKnown RBP23.13■■□□□ 1.29
TDP1-206ENST00000553569 TBC1D3HP0C7X1 549 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 ZNF806P0C7X5 589 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 DPP6P42658 865 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 CDKN2BP42772 138 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 SLC10A7Q0GE19 358 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 KAZNQ674X7 775 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 SLC9A4Q6AI14 798 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 TBC1D3GQ6DHY5 549 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 TBC1D3CQ6IPX1 549 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 SPOCD1Q6ZMY3 1216 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 ERN2Q76MJ5 926 aaKnown RBP23.13■■□□□ 1.29
TDP1-206ENST00000553569 PARS2Q7L3T8 475 aaKnown RBP23.13■■□□□ 1.29
TDP1-206ENST00000553569 TBC1D3Q8IZP1 549 aaPredicted RBP23.13■■□□□ 1.29
TDP1-206ENST00000553569 GPR161Q8N6U8 529 aaKnown RBP23.13■■□□□ 1.29
TDP1-206ENST00000553569 PLD5Q8N7P1 536 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 LRRC57Q8N9N7 239 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 C12orf50Q8NA57 414 aaPredicted RBP23.13■■□□□ 1.29
TDP1-206ENST00000553569 LRRN4Q8WUT4 740 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 FAM131CQ96AQ9 280 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 BIRC7Q96CA5 298 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 LRIG1Q96JA1 1093 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 ZNF830Q96NB3 372 aaPredicted RBP23.13■■□□□ 1.29
TDP1-206ENST00000553569 KLHL32Q96NJ5 620 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 OSBPL1AQ9BXW6 950 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 DTLQ9NZJ0 730 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 EIF2B4Q9UI10 523 aaKnown RBP23.13■■□□□ 1.29
TDP1-206ENST00000553569 HEY1Q9Y5J3 304 aa23.13■■□□□ 1.29
TDP1-206ENST00000553569 ANKRD36A6QL64 1941 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 MUSKO15146 869 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 PIGNO95427 931 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 PEX11BO96011 259 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 CFIP05156 583 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 KRT10P13645 584 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 CTNNA1P35221 906 aaKnown RBP23.12■■□□□ 1.29
TDP1-206ENST00000553569 NEK3P51956 506 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 PPP2CBP62714 309 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 PPP2CAP67775 309 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 SLC10A2Q12908 348 aaPredicted RBP23.12■■□□□ 1.29
TDP1-206ENST00000553569 ZNF805Q5CZA5 627 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 NPNTQ6UXI9 565 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 GDPD4Q6W3E5 623 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 ZCCHC9Q8N567 271 aaKnown RBP23.12■■□□□ 1.29
TDP1-206ENST00000553569 HDAC8Q9BY41 377 aa23.12■■□□□ 1.29
TDP1-206ENST00000553569 TSGA10Q9BZW7 698 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms