RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 POMCP01189 267 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 THRAP10827 490 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 ANPEPP15144 967 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 STMN1P16949 149 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-205ENST00000553474 GLDCP23378 1020 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 CD52P31358 61 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 ARRB2P32121 409 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 ARCN1P48444 511 aaKnown RBP13.08□□□□□ -0.32
SHMT2-205ENST00000553474 POU4F1Q01851 419 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 HNRNPDQ14103 355 aaKnown RBP13.08□□□□□ -0.32
SHMT2-205ENST00000553474 SEL1L3Q68CR1 1132 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 MSANTD2Q6P1R3 559 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 MON1AQ86VX9 555 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 DCP1BQ8IZD4 617 aaKnown RBP13.08□□□□□ -0.32
SHMT2-205ENST00000553474 ZNF781Q8N8C0 355 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 TDRD5Q8NAT2 981 aaKnown RBP13.08□□□□□ -0.32
SHMT2-205ENST00000553474 OR10T2Q8NGX3 314 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 FBXO27Q8NI29 283 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 FAM136AQ96C01 138 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 ATXN7L3BQ96GX2 97 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 PAWRQ96IZ0 340 aaKnown RBP13.08□□□□□ -0.32
SHMT2-205ENST00000553474 RANBP9Q96S59 729 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 CCDC28BQ9BUN5 200 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 GATA5Q9BWX5 397 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-205ENST00000553474 FSD1LQ9BXM9 530 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 RHOBTB2Q9BYZ6 727 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 VCXQ9H320 206 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 TREX1Q9NSU2 369 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 TMLHEQ9NVH6 421 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 OSER1Q9NX31 292 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 TLR6Q9Y2C9 796 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 MIA3Q5JRA6 1907 aa13.08□□□□□ -0.32
SHMT2-205ENST00000553474 NYNRINQ9P2P1 1898 aaKnown RBP13.08□□□□□ -0.32
SHMT2-205ENST00000553474 HEATR9A2RTY3 570 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 CCDC85CA6NKD9 419 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 TARM1B6A8C7 271 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 NPHS1O60500 1241 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 NEBLO76041 1014 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 PAPSS2O95340 614 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 EOMESO95936 686 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 AHSGP02765 367 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 SLC35E2BP0CK96 405 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 NCF2P19878 526 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 THPOP40225 353 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 BRCC3P46736 316 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 RENBPP51606 427 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 RABGGTBP53611 331 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 MLLT6P55198 1093 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 SESN3P58005 492 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 XIAPP98170 497 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 TNK2Q07912 1038 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 NFE2Q16621 373 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 SH2D4BQ5SQS7 431 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 DENND5AQ6IQ26 1287 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 RANBP10Q6VN20 620 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 ACAD11Q709F0 780 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 OTOP3Q7RTS5 596 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 LRRTM3Q86VH5 581 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 UMODL1-AS1Q8N2C9 162 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 TMEM151AQ8N4L1 468 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 C2CD4AQ8NCU7 369 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 APOL2Q9BQE5 337 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 PPP1R12CQ9BZL4 782 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 SLC39A8Q9C0K1 460 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 SIK2Q9H0K1 926 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 SLC25A51Q9H1U9 297 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 CAB39LQ9H9S4 337 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 PRPF19Q9UMS4 504 aaKnown RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 SCML2Q9UQR0 700 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 NOD1Q9Y239 953 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 ALPK3Q96L96 1907 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 A6NHS1 94 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 E9PAM4 449 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 MGEA5O60502 916 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 OAZ2O95190 189 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 COX4I1P13073 169 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 TPH1P17752 444 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 GRIK1P39086 918 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 ABL2P42684 1182 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 DNAJB13P59910 316 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 IRF9Q00978 393 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 DLG2Q15700 870 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 TRIM68Q6AZZ1 485 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 ANO7Q6IWH7 933 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 NAPRTQ6XQN6 538 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 PIWIL4Q7Z3Z4 852 aaKnown RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 ZNF598Q86UK7 904 aaKnown RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 CPSF7Q8N684 471 aaKnown RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 IPMKQ8NFU5 416 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 RP9Q8TA86 221 aaKnown RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 SCAMP5Q8TAC9 235 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 NRG4Q8WWG1 115 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 AZIN2Q96A70 460 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 C8orf48Q96LL4 319 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 SERPINI1Q99574 410 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 ADAM2Q99965 735 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 MRPL57Q9BQC6 102 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms