RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 BRAFP15056 766 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 CHRNA4P43681 627 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 KCNC3Q14003 757 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 TUBB8Q3ZCM7 444 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 ANKRD20A4Q4UJ75 823 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 MPPE1Q53F39 396 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 PPP2R2DQ66LE6 453 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 KDELC2Q7Z4H8 507 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 GDPD5Q8WTR4 605 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 LMAN2LQ9H0V9 348 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 UGT1A7Q9HAW7 530 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 UGT1A10Q9HAW8 530 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 UGT1A8Q9HAW9 530 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 CLEC4EQ9ULY5 219 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 IKBKGQ9Y6K9 419 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 FAM169AQ9Y6X4 670 aa19.83■□□□□ 0.76
RBFOX1-215ENST00000553186 SNAP91O60641 907 aa19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 CHN1P15882 459 aa19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 NRIP1P48552 1158 aa19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 MPP2Q14168 576 aa19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 FRG1Q14331 258 aaKnown RBP19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 TPGS1Q6ZTW0 290 aa19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 MFN1Q8IWA4 741 aa19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 C12orf76Q8N812 135 aaPredicted RBP19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 VN1R2Q8NFZ6 395 aa19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 TRABDQ9H4I3 376 aa19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 PLK2Q9NYY3 685 aa19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 SENP1Q9P0U3 644 aa19.82■□□□□ 0.76
RBFOX1-215ENST00000553186 TMEM120BA0PK00 339 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 CSKP41240 450 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 DMTNQ08495 405 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 CYTH1Q15438 398 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 COL13A1Q5TAT6 717 aaPredicted RBP19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 ZNF449Q6P9G9 518 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 ZNF669Q96BR6 464 aaPredicted RBP19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 ZNF778Q96MU6 729 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 MSRAQ9UJ68 235 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 LOC285095A0A1B0GVY8 99 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 ZNF197O14709 1029 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 CEBPBP17676 345 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 CR2P20023 1033 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 RGRP47804 291 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 MSLNQ13421 630 aaPredicted RBP19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 PCID2Q5JVF3 399 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 FYB2Q5VWT5 728 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 ELMSAN1Q6PJG2 1045 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 BBS5Q8N3I7 341 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 CERS2Q96G23 380 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 CINPQ9BW66 212 aaPredicted RBP19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 IL1RAPL1Q9NZN1 696 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 VPS28Q9UK41 221 aa19.81■□□□□ 0.76
RBFOX1-215ENST00000553186 IQANK1A0A1B0GTG1 560 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 CBX2Q14781 532 aaPredicted RBP19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 POU6F1Q14863 301 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 SLC1A5Q15758 541 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 RAB30Q15771 203 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 ZNF77Q15935 545 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 PKN3Q6P5Z2 889 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 LINGO4Q6UY18 593 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 MARK2Q7KZI7 788 aaKnown RBP19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 ING5Q8WYH8 240 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 SMG7Q92540 1137 aaKnown RBP19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 NSMCE3Q96MG7 304 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 PPANQ9NQ55 473 aaKnown RBP19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 SLC17A6Q9P2U8 582 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 VPS51Q9UID3 782 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 ZMYM5Q9UJ78 669 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 ERVK-10P10266 1014 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 NMBRP28336 390 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 LSP1P33241 339 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 MGAT5Q09328 741 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 TMC5Q6UXY8 1006 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 DCAF4L2Q8NA75 395 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 FIBINQ8TAL6 211 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 ITFG1Q8TB96 612 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 NOD2Q9HC29 1040 aa19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 MRPS23Q9Y3D9 190 aaKnown RBP19.8■□□□□ 0.76
RBFOX1-215ENST00000553186 ATXN1LP0C7T5 689 aaKnown RBP19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 INO80DQ53TQ3 878 aaPredicted RBP19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 ARID3BQ8IVW6 561 aaPredicted RBP19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 APCDD1Q8J025 514 aa19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 C4orf33Q8N1A6 199 aa19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 SLC25A41Q8N5S1 370 aa19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 PTCD2Q8WV60 388 aaKnown RBP19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 ATXN2LQ8WWM7 1075 aaKnown RBP19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 CDKL2Q92772 493 aa19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 CENPTQ96BT3 561 aa19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 SLC28A3Q9HAS3 691 aa19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 KCNK9Q9NPC2 374 aa19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 HAUS2Q9NVX0 235 aa19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 HELZP42694 1942 aaKnown RBP19.79■□□□□ 0.76
RBFOX1-215ENST00000553186 HMX2A2RU54 273 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 TMCC1O94876 653 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 TCF3P15923 654 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 KRT4P19013 534 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 USP4Q13107 963 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 SLC14A2Q15849 920 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 SH2D5Q6ZV89 423 aa19.78■□□□□ 0.76
RBFOX1-215ENST00000553186 TMEM25Q86YD3 366 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms