RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 TCTN3Q6NUS6 607 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 NEK5Q6P3R8 708 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 KYAT3Q6YP21 454 aaKnown RBP6.89□□□□□ -1.31
LETMD1-236ENST00000553043 TIPARPQ7Z3E1 657 aaKnown RBP6.89□□□□□ -1.31
LETMD1-236ENST00000553043 MCEMP1Q8IX19 187 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 TP53INP2Q8IXH6 220 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 NELFCDQ8IXH7 590 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 CCDC13Q8IYE1 715 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 SLC34A3Q8N130 599 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 CFAP52Q8N1V2 620 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 ARL10Q8N8L6 244 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 ANKRD52Q8NB46 1076 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 KYQ8NBH2 561 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 FAM174AQ8TBP5 190 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 RNF139Q8WU17 664 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 BTN2A2Q8WVV5 523 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 KCTD13Q8WZ19 329 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 EDEM1Q92611 657 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 MYEOVQ96EZ4 313 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 SLC45A3Q96JT2 553 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 FAM81BQ96LP2 452 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 TWNKQ96RR1 684 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 EPAS1Q99814 870 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 LRRC61Q9BV99 259 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 CLPBQ9H078 707 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 CDH19Q9H159 772 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 GDPD2Q9HCC8 539 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 GPR27Q9NS67 375 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 HOOK1Q9UJC3 728 aaKnown RBP6.89□□□□□ -1.31
LETMD1-236ENST00000553043 DOLKQ9UPQ8 538 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 HBS1LQ9Y450 684 aaKnown RBP6.89□□□□□ -1.31
LETMD1-236ENST00000553043 NF1P21359 2839 aa6.89□□□□□ -1.31
LETMD1-236ENST00000553043 SPG11Q96JI7 2443 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 TYW5A2RUC4 315 aaKnown RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 HMGB1P1B2RPK0 211 aaPredicted RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 CETN3O15182 167 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 CAPN5O15484 640 aaPredicted RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 IRAK2O43187 625 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 RAD1O60671 282 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 ZNF202O95125 648 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 HLA-DRAP01903 254 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 PAEPP09466 180 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 SETSIPP0DME0 302 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 TSHRP16473 764 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 RABIFP47224 123 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 RPL34P49207 117 aaKnown RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 MARSP56192 900 aaKnown RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 NUCB2P80303 420 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 ADAM9Q13443 819 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 PTK2BQ14289 1009 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 ZXDCQ2QGD7 858 aaPredicted RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 FAM133BQ5BKY9 247 aaKnown RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 PPP1R26Q5T8A7 1209 aaPredicted RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 ZNF658Q5TYW1 1059 aaPredicted RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 ZNF662Q6ZS27 426 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 CCNJLQ8IV13 435 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 FAM186BQ8IYM0 893 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 PHACTR4Q8IZ21 702 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 UNC5BQ8IZJ1 945 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 HJURPQ8NCD3 748 aaPredicted RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 TAS1R2Q8TE23 839 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 FRS2Q8WU20 508 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 IRGQQ8WZA9 623 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 C5orf34Q96MH7 638 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 PRICKLE1Q96MT3 831 aaPredicted RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 TRIM62Q9BVG3 475 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 SLC17A9Q9BYT1 436 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 SLC13A1Q9BZW2 595 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 BLZF1Q9H2G9 400 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 SEMA6CQ9H3T2 930 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 GPN2Q9H9Y4 310 aaPredicted RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 RAB20Q9NX57 234 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 AKAP7Q9P0M2 348 aaPredicted RBP6.88□□□□□ -1.31
LETMD1-236ENST00000553043 MAP10Q9P2G4 905 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 KCND3Q9UK17 655 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 ZDHHC9Q9Y397 364 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 MAP4K5Q9Y4K4 846 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 ESPL1Q14674 2120 aa6.88□□□□□ -1.31
LETMD1-236ENST00000553043 CELSR2Q9HCU4 2923 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 SDK2Q58EX2 2172 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 A0A1B0GVL5 298 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 KPNA3O00505 521 aaPredicted RBP6.87□□□□□ -1.31
LETMD1-236ENST00000553043 XPO1O14980 1071 aaKnown RBP6.87□□□□□ -1.31
LETMD1-236ENST00000553043 MCF2LO15068 1137 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 SART1O43290 800 aaKnown RBP6.87□□□□□ -1.31
LETMD1-236ENST00000553043 ACSL4O60488 711 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 SMC2O95347 1197 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 GNA14O95837 355 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 ZBED1O96006 694 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 PDGFAP04085 211 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 EPB41P11171 864 aaKnown RBP6.87□□□□□ -1.31
LETMD1-236ENST00000553043 PIK3CAP42336 1068 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 RECQLP46063 649 aaPredicted RBP6.87□□□□□ -1.31
LETMD1-236ENST00000553043 SLC11A2P49281 568 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 CASP4P49662 377 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 MXI1P50539 228 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 TKTL1P51854 596 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 NDUFA8P51970 172 aa6.87□□□□□ -1.31
LETMD1-236ENST00000553043 COPB1P53618 953 aaKnown RBP6.87□□□□□ -1.31
LETMD1-236ENST00000553043 DLG4P78352 724 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms