RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 HECAQ9UBI9 543 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 TRIM10Q9UDY6 481 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 CEP250Q9BV73 2442 aa11.9□□□□□ -0.5
TRAFD1-209ENST00000552896 A0A0U1RQJ8 604 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 CCDC66A2RUB6 948 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 LRRC72A6NJI9 287 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 MEI4A8MW99 385 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 KPNA3O00505 521 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 APOL1O14791 398 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 PLRG1O43660 514 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 KRT86O43790 486 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 PALMO75781 387 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 POP4O95707 220 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 TNNT1P13805 278 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 ZFXP17010 805 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 MX2P20592 715 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 CTNNA2P26232 953 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 ACSL1P33121 698 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 HSPA9P38646 679 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 CDKN2BP42772 138 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 PTGER3P43115 390 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 CREB5Q02930 508 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 ZNF33AQ06730 810 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 CCDC15Q0P6D6 951 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 GRM3Q14832 879 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 CYTH1Q15438 398 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 PPP2R5EQ16537 467 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 PLA2G2CQ5R387 149 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 SYCP2LQ5T4T6 812 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 ATXN7L2Q5T6C5 722 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 PIP5KL1Q5T9C9 394 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 TIGD7Q6NT04 549 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 MFSD7Q6UXD7 560 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 SPOCD1Q6ZMY3 1216 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 ZNF662Q6ZS27 426 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 ARMCX6Q7L4S7 300 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 RABEPKQ7Z6M1 372 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 ALYREFQ86V81 257 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 SLC41A1Q8IVJ1 513 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 HDDC3Q8N4P3 179 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 RNF10Q8N5U6 811 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 GPR161Q8N6U8 529 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 OR2T34Q8NGX1 318 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 OR6K2Q8NGY2 324 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 EXD1Q8NHP7 514 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 KIAA1524Q8TCG1 905 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 KRT35Q92764 455 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 HDAC11Q96DB2 347 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 ZNF419Q96HQ0 510 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 HDAC8Q9BY41 377 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 NEUROG2Q9H2A3 272 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 KDM4CQ9H3R0 1056 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 DYRK4Q9NR20 520 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 SEPT3Q9UH03 358 aa11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 TPX2Q9ULW0 747 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-209ENST00000552896 C10orf142B7Z368 130 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 KRIT1O00522 736 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 FOXD2O60548 495 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 PEX11BO96011 259 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 CSNK1DP48730 415 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 RENBPP51606 427 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 NEK3P51956 506 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 COPS2P61201 443 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 GBE1Q04446 702 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 RAD51Q06609 339 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 CNTN1Q12860 1018 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 TFDP2Q14188 446 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 ZNF235Q14590 738 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 LBRQ14739 615 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 MYLK3Q32MK0 819 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 POM121L1PQ3SYA9 428 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 ARSIQ5FYB1 569 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 TFDP3Q5H9I0 405 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 WDR45BQ5MNZ6 344 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 NT5DC3Q86UY8 548 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 RFX6Q8HWS3 928 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 SYT12Q8IV01 421 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 RCOR2Q8IZ40 523 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 BBS5Q8N3I7 341 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 RYBPQ8N488 228 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 NSMCE1Q8WV22 266 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 VOPP1Q96AW1 172 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 ARRDC3Q96B67 414 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 RNF25Q96BH1 459 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 PDLIM2Q96JY6 352 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 EXOC2Q96KP1 924 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 TSGA13Q96PP4 275 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 PSKH2Q96QS6 385 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 TUBGCP5Q96RT8 1024 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 MAK16Q9BXY0 300 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 CPEB1Q9BZB8 566 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 ARRDC1-AS1Q9H2J1 176 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 C6orf106Q9H6K1 298 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 PREBQ9HCU5 417 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 VPS45Q9NRW7 570 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 DTLQ9NZJ0 730 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 PILRBQ9UKJ0 227 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 PCDHA3Q9Y5H8 950 aa11.88□□□□□ -0.51
TRAFD1-209ENST00000552896 CAPN6Q9Y6Q1 641 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms