RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 BNIP3LO60238 219 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 DFNA5O60443 496 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 EPN2O95208 641 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 MT-CO1P00395 513 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 APOC2P02655 101 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 SYPP08247 313 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 TNNT1P13805 278 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 IL4RP24394 825 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 MMP13P45452 471 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 PSMD8P48556 350 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 PXNP49023 591 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 TAS2R40P59535 323 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 BCL2L1Q07817 233 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 TAZQ16635 292 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 ARTNQ5T4W7 220 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 KIAA1161Q6NSJ0 714 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 ERAP2Q6P179 960 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 IL27RAQ6UWB1 636 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 LINGO4Q6UY18 593 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 GDPD4Q6W3E5 623 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 DPY19L3Q6ZPD9 716 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 ERN2Q76MJ5 926 aaKnown RBP10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 PRPF39Q86UA1 669 aaKnown RBP10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 ARHGAP12Q8IWW6 846 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 RAVER1Q8IY67 606 aaKnown RBP10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 HDDC3Q8N4P3 179 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 LRRC57Q8N9N7 239 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 SUMF1Q8NBK3 374 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 OR52K2Q8NGK3 314 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 PCDH19Q8TAB3 1148 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 SPOCK2Q92563 424 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 RAPGEF5Q92565 580 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 CELF6Q96J87 481 aaKnown RBP10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 PDLIM2Q96JY6 352 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 LACRTQ9GZZ8 138 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 HOMER3Q9NSC5 361 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 NDFIP2Q9NV92 336 aa10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 EVLQ9UI08 416 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 ZFHX2Q9C0A1 2572 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-208ENST00000552890 PLXND1Q9Y4D7 1925 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TBC1D3DA0A087WVF3 549 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TBC1D3IA0A087WXS9 549 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TBC1D3EA0A087X179 549 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TBC1D3KA0A087X1G2 549 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 BCLAF3A2AJT9 711 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 CFAP69A5D8W1 941 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 GOLGA6CA6NDK9 693 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 GOLGA6BA6NDN3 693 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TBC1D3FA6NER0 549 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 METTL12A8MUP2 240 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TBC1D3LB9A6J9 549 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 NEMP1O14524 444 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TOR1BO14657 336 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 KHNYNO15037 678 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 MID1O15344 667 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 SMAD6O43541 496 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 KIF5CO60282 957 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 GFRA3O60609 400 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 MAFKO60675 156 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 LEFTY1O75610 366 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 SERPINF2P08697 491 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TBC1D3HP0C7X1 549 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 GOLGA6DP0CG33 693 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 CCNB1P14635 433 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 CD27P26842 260 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 CDKN2BP42772 138 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 DHPSP49366 369 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 RPL26P61254 145 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 RPS21P63220 83 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 LMNB2Q03252 620 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 PPIDQ08752 370 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 RPS6KA1Q15418 735 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 SLC14A2Q15849 920 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 CSRP2Q16527 193 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 DUOXA1Q1HG43 343 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 SETMARQ53H47 684 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 SEL1L2Q5TEA6 688 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TBC1D3GQ6DHY5 549 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TBC1D3CQ6IPX1 549 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 CCDC70Q6NSX1 233 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 SPOCD1Q6ZMY3 1216 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 BBS12Q6ZW61 710 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 SRLQ86TD4 932 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 NT5DC3Q86UY8 548 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 CCDC13Q8IYE1 715 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 RGL4Q8IZJ4 473 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TBC1D3Q8IZP1 549 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 FAM160A2Q8N612 972 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TEX26Q8N6G2 289 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 PLD5Q8N7P1 536 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 ZNF366Q8N895 744 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 C12orf50Q8NA57 414 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 OR14C36Q8NHC7 312 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 TFB1MQ8WVM0 346 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 DNASE2BQ8WZ79 361 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 FAM131CQ96AQ9 280 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 NUDCD1Q96RS6 583 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 DESI2Q9BSY9 194 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 KLC2Q9H0B6 622 aa10.41□□□□□ -0.74
TRAFD1-208ENST00000552890 CARD9Q9H257 536 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms