RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 KRT72Q14CN4 511 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 CNGA3Q16281 694 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 C5orf22Q49AR2 442 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 FAM91A1Q658Y4 838 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 KIAA0930Q6ICG6 404 aaPredicted RBP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 SLC39A5Q6ZMH5 540 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 RNF168Q8IYW5 571 aaPredicted RBP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 SLC25A41Q8N5S1 370 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 UTP4Q969X6 686 aaKnown RBP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 TADA1Q96BN2 335 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 NSL1Q96IY1 281 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 VN1R3Q9BXE9 311 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 WWP1Q9H0M0 922 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 ARL8BQ9NVJ2 186 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 MARCOQ9UEW3 520 aaPredicted RBP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 ANKRD6Q9Y2G4 727 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 STK38LQ9Y2H1 464 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 ACSL4O60488 711 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 LYPLA1O75608 230 aaPredicted RBP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 RALBP11234 206 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 CCL5P13501 91 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 PTPN4P29074 926 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 POLD2P49005 469 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 SERPINH1P50454 418 aaKnown RBP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 THOC5Q13769 683 aaKnown RBP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 SEPT6Q14141 434 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 IHHQ14623 411 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 SNX30Q5VWJ9 437 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 DENND6AQ8IWF6 608 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 LGI2Q8N0V4 545 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 PGBD5Q8N414 524 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 PDZD8Q8NEN9 1154 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 OR6Y1Q8NGX8 325 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 OVCA2Q8WZ82 227 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 PTCD3Q96EY7 689 aaKnown RBP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 PRR11Q96HE9 360 aaPredicted RBP14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 IGSF21Q96ID5 467 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 RANBP9Q96S59 729 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 SIKE1Q9BRV8 207 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 RNF208Q9H0X6 261 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 BAIAP2L1Q9UHR4 511 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 TLK1Q9UKI8 766 aa14.19□□□□□ -0.14
RAB3IP-216ENST00000552199 HEATR9A2RTY3 570 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 F5H5T6 163 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 G3V2L1 256 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 ATP5BP06576 529 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 ACVRL1P37023 503 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 MPP1Q00013 466 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 CTBP1Q13363 440 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 MSLNQ13421 630 aaPredicted RBP14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 USP10Q14694 798 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 LBRQ14739 615 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 ALYREFQ86V81 257 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 WDR75Q8IWA0 830 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 TNS4Q8IZW8 715 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 ARRDC2Q8TBH0 407 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 PIWIL2Q8TC59 973 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 MAGEC3Q8TD91 643 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 TBC1D10AQ9BXI6 508 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 NMUR2Q9GZQ4 415 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 NMRAL1Q9HBL8 299 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 NOD2Q9HC29 1040 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 AFF4Q9UHB7 1163 aaKnown RBP14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 DNAJC16Q9Y2G8 782 aa14.18□□□□□ -0.14
RAB3IP-216ENST00000552199 ZNF840PA6NDX5 716 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 PRAMEF11O60813 436 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 GJB5O95377 273 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 SEC24AO95486 1093 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 APOA4P06727 396 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 SLC6A4P31645 630 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 ETFBP38117 255 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 HARS2P49590 506 aaKnown RBP14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 ABCE1P61221 599 aaKnown RBP14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 TLE2Q04725 743 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 ITGA9Q13797 1035 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 IKBKEQ14164 716 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 TSTD2Q5T7W7 516 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 KIAA1841Q6NSI8 718 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 RAPH1Q70E73 1250 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 TTC7BQ86TV6 843 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 LCA5Q86VQ0 697 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 SLC41A1Q8IVJ1 513 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 C2CD4AQ8NCU7 369 aaPredicted RBP14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 PPP4R1Q8TF05 950 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 ZNF512Q96ME7 567 aaPredicted RBP14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 SORT1Q99523 831 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 CLSTN3Q9BQT9 956 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 FAM167BQ9BTA0 163 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 C1QTNF1Q9BXJ1 281 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 RETREG1Q9H6L5 497 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 TLE6Q9H808 572 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 CHD5Q8TDI0 1954 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 LOC285095A0A1B0GVY8 99 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 TTC24A2A3L6 582 aaPredicted RBP14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 CHUKO15111 745 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 HMGA1P17096 107 aaKnown RBP14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 SAT1P21673 171 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 DNAJB1P25685 340 aa14.17□□□□□ -0.14
RAB3IP-216ENST00000552199 SLC1A2P43004 574 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms