RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 AQP7P3A6NL99 342 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 OVOL3O00110 214 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 HGSO14964 777 aaPredicted RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 ZNF185O15231 689 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 CUTAO60888 179 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 DIRAS3O95661 229 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 MPIG6BO95866 241 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 URODP06132 367 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 TPM1P09493 284 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 LTA4HP09960 611 aaKnown RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 ACTN1P12814 892 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 ZFXP17010 805 aaPredicted RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 GCLCP48506 637 aaPredicted RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 EPHB4P54760 987 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 YWHAZP63104 245 aaKnown RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 RELQ04864 619 aaPredicted RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 GRIN1Q05586 938 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 CBFBQ13951 182 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 ZNF273Q14593 569 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 TBRG1Q3YBR2 411 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 UTP14CQ5TAP6 766 aaKnown RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 AADACL4Q5VUY2 407 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 ABLIM2Q6H8Q1 611 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 HMBOX1Q6NT76 420 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 RBM43Q6ZSC3 357 aaKnown RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 ARMCX2Q7L311 632 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 PARS2Q7L3T8 475 aaKnown RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 TRABD2AQ86V40 505 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 ARHGAP12Q8IWW6 846 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 TRIM48Q8IWZ4 208 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 SPERTQ8NA61 448 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 RBM15BQ8NDT2 890 aaKnown RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 SUPT20HQ8NEM7 779 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 TNIP2Q8NFZ5 429 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 OR7D4Q8NG98 312 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 THRSPQ92748 146 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 DVL3Q92997 716 aaPredicted RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 FAM149B1Q96BN6 582 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 ZBTB8AQ96BR9 441 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 ADAD1Q96M93 576 aaKnown RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 C5orf34Q96MH7 638 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 GDAP1L1Q96MZ0 367 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 INTS14Q96SY0 518 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 PIMREGQ9BSJ6 248 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 FAM83DQ9H4H8 585 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 YY1AP1Q9H869 796 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 POLR1BQ9H9Y6 1135 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 IARS2Q9NSE4 1012 aaKnown RBP6.45□□□□□ -1.38
VPS29-210ENST00000552130 HSPBP1Q9NZL4 362 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 KCMF1Q9P0J7 381 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 CFAP97Q9P2B7 532 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 TLK1Q9UKI8 766 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 MTMR6Q9Y217 621 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 CDYLQ9Y232 598 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 RWDD3Q9Y3V2 267 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 CAPN7Q9Y6W3 813 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 TTC41PQ6P2S7 1318 aa6.45□□□□□ -1.38
VPS29-210ENST00000552130 A0A0A6YYK5 440 aaPredicted RBP6.44□□□□□ -1.38
VPS29-210ENST00000552130 SLC38A8A6NNN8 435 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 H0YIV9 168 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 RASGRF2O14827 1237 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 LDLRAD4O15165 306 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 ADAMDEC1O15204 470 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 ZSCAN9O15535 394 aaPredicted RBP6.44□□□□□ -1.38
VPS29-210ENST00000552130 GMFGO60234 142 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 CYTIPO60759 359 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 SPAG6O75602 509 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 SLCO2B1O94956 709 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 AKR7A3O95154 331 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 KCNK5O95279 499 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 PRAMEF12O95522 483 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 PLGP00747 810 aaPredicted RBP6.44□□□□□ -1.38
VPS29-210ENST00000552130 SLPIP03973 132 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 C1SP09871 688 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 UROSP10746 265 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 ETS1P14921 441 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 CSF2RAP15509 400 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 PRLRP16471 622 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 GNAT2P19087 354 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 PCSK1P29120 753 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 ACVRL1P37023 503 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 MDH1P40925 334 aaKnown RBP6.44□□□□□ -1.38
VPS29-210ENST00000552130 PNPLA4P41247 253 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 CCR3P51677 355 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 SLC20A2Q08357 652 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 FRG1Q14331 258 aaKnown RBP6.44□□□□□ -1.38
VPS29-210ENST00000552130 CDSNQ15517 529 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 C15orf59Q2T9L4 293 aaPredicted RBP6.44□□□□□ -1.38
VPS29-210ENST00000552130 GRAMD4Q6IC98 578 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 KIAA0930Q6ICG6 404 aaPredicted RBP6.44□□□□□ -1.38
VPS29-210ENST00000552130 INTS8Q75QN2 995 aaKnown RBP6.44□□□□□ -1.38
VPS29-210ENST00000552130 KCTD9Q7L273 389 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 RFX6Q8HWS3 928 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 KLHL7Q8IXQ5 586 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 FSTL5Q8N475 847 aaPredicted RBP6.44□□□□□ -1.38
VPS29-210ENST00000552130 BANPQ8N9N5 519 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 CAMKVQ8NCB2 501 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 SHCBP1Q8NEM2 672 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 OR52M1Q8NGK5 317 aa6.44□□□□□ -1.38
VPS29-210ENST00000552130 ZNF480Q8WV37 535 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms