RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 CAPN8A6NHC0 703 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 HAS3O00219 553 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 PGK1P00558 417 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 CTSHP09668 335 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 PPARGP37231 505 aaPredicted RBP13.21□□□□□ -0.3
CACNB3-219ENST00000551544 THOP1P52888 689 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 COG7P83436 770 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 ANKRD23Q86SG2 305 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 LSMEM2Q8N112 164 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 B4GALNT2Q8NHY0 566 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 RP9Q8TA86 221 aaKnown RBP13.21□□□□□ -0.3
CACNB3-219ENST00000551544 DPF3Q92784 378 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 ELMO2Q96JJ3 720 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 GCNAQ96QF7 691 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 SERPINI1Q99574 410 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 FAM105AQ9NUU6 356 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 STK39Q9UEW8 545 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 CPA4Q9UI42 421 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 COMMD3-BMI1R4GMX3 469 aa13.21□□□□□ -0.3
CACNB3-219ENST00000551544 FAM163BP0C2L3 166 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 STMN1P16949 149 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 XRCC1P18887 633 aaPredicted RBP13.2□□□□□ -0.3
CACNB3-219ENST00000551544 ALDH1A3P47895 512 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 RAB10P61026 200 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 MRPS22P82650 360 aaKnown RBP13.2□□□□□ -0.3
CACNB3-219ENST00000551544 SEPT6Q14141 434 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 FLOT2Q14254 428 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 CNGA3Q16281 694 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 EML3Q32P44 896 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 TIGD5Q53EQ6 642 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 BNC2Q6ZN30 1099 aaPredicted RBP13.2□□□□□ -0.3
CACNB3-219ENST00000551544 ICA1LQ8NDH6 482 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 SCAMP5Q8TAC9 235 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 HASPINQ8TF76 798 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 CNDP1Q96KN2 507 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 AP5M1Q9H0R1 490 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 A0A1B0GVG6 124 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 STX16-NPEPL1H3BU86 382 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 AP3B1O00203 1094 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 PSMD3O43242 534 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 CSRP3P50461 194 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 CCL14Q16627 93 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 UGP2Q16851 508 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 ZNF280DQ6N043 979 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 ST13P4Q8IZP2 240 aaPredicted RBP13.2□□□□□ -0.3
CACNB3-219ENST00000551544 PQLC1Q8N2U9 271 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 PPHLN1Q8NEY8 458 aaKnown RBP13.2□□□□□ -0.3
CACNB3-219ENST00000551544 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
CACNB3-219ENST00000551544 DTNAQ9Y4J8 743 aa13.2□□□□□ -0.3
CACNB3-219ENST00000551544 DNAH12Q6ZR08 3092 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 ARL5CA6NH57 179 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 ZNF865P0CJ78 1059 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-219ENST00000551544 ARNTP27540 789 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 PCSK1P29120 753 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 SLC1A2P43004 574 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 CHRNA4P43681 627 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 CPT1AP50416 773 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 ART3Q13508 389 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 ZNF470Q6ECI4 717 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 PTPN18Q99952 460 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 FSD1LQ9BXM9 530 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 SLC39A8Q9C0K1 460 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 SUDS3Q9H7L9 328 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-219ENST00000551544 GLOD4Q9HC38 313 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 NDFIP2Q9NV92 336 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 VTI1BQ9UEU0 232 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 NUDT5Q9UKK9 219 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 PRPF19Q9UMS4 504 aaKnown RBP13.19□□□□□ -0.3
CACNB3-219ENST00000551544 CENPFP49454 3210 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 NEMP2A6NFY4 417 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 TARM1B6A8C7 271 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 MSI1O43347 362 aaKnown RBP13.19□□□□□ -0.3
CACNB3-219ENST00000551544 ANXA9O76027 345 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 HNRNPLP14866 589 aaKnown RBP eCLIP13.19□□□□□ -0.3
CACNB3-219ENST00000551544 TCN1P20061 433 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-219ENST00000551544 CCNCP24863 283 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 ZNF135P52742 658 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-219ENST00000551544 TAS2R39P59534 338 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 FOLH1Q04609 750 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 PDK3Q15120 406 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 SH2D4BQ5SQS7 431 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 MAP3K21Q5TCX8 1036 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 DENND5AQ6IQ26 1287 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 ISLR2Q6UXK2 745 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 ARHGAP12Q8IWW6 846 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 FAM81AQ8TBF8 368 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 TMA16Q96EY4 203 aaKnown RBP13.19□□□□□ -0.3
CACNB3-219ENST00000551544 TSGA13Q96PP4 275 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 NDNQ99608 321 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 RTP3Q9BQQ7 232 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 WDR41Q9HAD4 459 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 CHST12Q9NRB3 414 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 TMLHEQ9NVH6 421 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 GTSE1Q9NYZ3 720 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 SFMBT1Q9UHJ3 866 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 PSMD13Q9UNM6 376 aa13.19□□□□□ -0.3
CACNB3-219ENST00000551544 UNCXA6NJT0 531 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms